|
Zhang, Y., Liu, Y., Qin, W., Zheng, S., Xiao, J., Xia, X., Yuan, X., Zeng, J., Shi, Y., Zhang, Y., Ma, H., Varshney, G.K., Fei, J.F., Liu, Y. (2024) Cytosine base editors with increased PAM and deaminase motif flexibility for gene editing in zebrafish. Nature communications. 15:95269526
|
|
Hadzhiev, Y., Wheatley, L., Cooper, L., Ansaloni, F., Whalley, C., Chen, Z., Finaurini, S., Gustincich, S., Sanges, R., Burgess, S., Beggs, A., Müller, F. (2023) The miR-430 locus with extreme promoter density forms a transcription body during the minor wave of zygotic genome activation. Developmental Cell. 58:155170.e8155-170.e8
|
Banu, S., Gaur, N., Nair, S., Ravikrishnan, T., Khan, S., Mani, S., Bharathi, S., Mandal, K., Kuram, N.A., Vuppaladadium, S., Ravi, R., Murthy, C.L.N., Quoseena, M., Babu, N.S., Idris, M.M. (2022) Transcriptomic and proteomic analysis of epimorphic regeneration in zebrafish caudal fin tissue. Genomics. 114(2):110300
|
|
Dam, S., Tangara, S., Hamela, C., Hattabi, T., Faïon, L., Carre, P., Antoine, R., Herledan, A., Leroux, F., Piveteau, C., Eveque, M., Flipo, M., Deprez, B., Kremer, L., Willand, N., Villemagne, B., Hartkoorn, R.C. (2022) Tricyclic SpiroLactams Kill Mycobacteria In Vitro and In Vivo by Inhibiting Type II NADH Dehydrogenases. Journal of medicinal chemistry. 65(24):16651-16664
|
Lagune, M., Le Moigne, V., Johansen, M.D., Vásquez Sotomayor, F., Daher, W., Petit, C., Cosentino, G., Paulowski, L., Gutsmann, T., Wilmanns, M., Maurer, F.P., Herrmann, J.L., Girard-Misguich, F., Kremer, L. (2022) The ESX-4 substrates, EsxU and EsxT, modulate Mycobacterium abscessus fitness. PLoS pathogens. 18:e1010771
|
Vicencio, J., Sánchez-Bolaños, C., Moreno-Sánchez, I., Brena, D., Vejnar, C.E., Kukhtar, D., Ruiz-López, M., Cots-Ponjoan, M., Rubio, A., Melero, N.R., Crespo-Cuadrado, J., Carolis, C., Pérez-Pulido, A.J., Giráldez, A.J., Kleinstiver, B.P., Cerón, J., Moreno-Mateos, M.A. (2022) Genome editing in animals with minimal PAM CRISPR-Cas9 enzymes. Nature communications. 13:2601
|
Avagyan, S., Henninger, J.E., Mannherz, W.P., Mistry, M., Yoon, J., Yang, S., Weber, M.C., Moore, J.L., Zon, L.I. (2021) Resistance to inflammation underlies enhanced fitness in clonal hematopoiesis. Science (New York, N.Y.). 374:768-772
|
Hathazi, D., Cox, D., D'Amico, A., Tasca, G., Charlton, R., Carlier, R.Y., Baumann, J., Kollipara, L., Zahedi, R.P., Feldmann, I., Deleuze, J.F., Torella, A., Cohn, R., Robinson, E., Ricci, F., Jungbluth, H., Fattori, F., Boland, A., O'Connor, E., Horvath, R., Barresi, R., Lochmüller, H., Urtizberea, A., Jacquemont, M.L., Nelson, I., Swan, L., Bonne, G., Roos, A. (2021) INPP5K and SIL1 associated pathologies with overlapping clinical phenotypes converge through dysregulation of PHGDH. Brain : a journal of neurology. 144(8):2427-2442
|
Johansen, M.D., Alcaraz, M., Dedrick, R.M., Roquet-Banères, F., Hamela, C., Hatfull, G.F., Kremer, L. (2021) Mycobacteriophage-antibiotic therapy promotes enhanced clearance of drug-resistant Mycobacterium abscessus. Disease models & mechanisms. 14(9):
|
Katz, S.R., Yakovlev, M.A., Vanselow, D.J., Ding, Y., Lin, A.Y., Parkinson, D.Y., Wang, Y., Canfield, V.A., Ang, K.C., Cheng, K.C. (2021) Whole-organism 3D quantitative characterization of zebrafish melanin by silver deposition micro-CT. eLIFE. 10:
|
Kroll, F., Powell, G.T., Ghosh, M., Gestri, G., Antinucci, P., Hearn, T.J., Tunbak, H., Lim, S., Dennis, H.W., Fernandez, J.M., Whitmore, D., Dreosti, E., Wilson, S.W., Hoffman, E.J., Rihel, J. (2021) A simple and effective F0 knockout method for rapid screening of behaviour and other complex phenotypes. eLIFE. 10:
|
Pohl, J., Golovko, O., Carlsson, G., Örn, S., Schmitz, M., Ahi, E.P. (2021) Gene co-expression network analysis reveals mechanisms underlying ozone-induced carbamazepine toxicity in zebrafish (Danio rerio) embryos. Chemosphere. 276:130282
|
Sullivan, J.R., Lupien, A., Kalthoff, E., Hamela, C., Taylor, L., Munro, K.A., Schmeing, T.M., Kremer, L., Behr, M.A. (2021) Efficacy of epetraborole against Mycobacterium abscessus is increased with norvaline. PLoS pathogens. 17:e1009965
|
|
Bryan, C.D., Casey, M.A., Pfeiffer, R.L., Jones, B.W., Kwan, K.M. (2020) Optic cup morphogenesis requires neural crest-mediated basement membrane assembly. Development (Cambridge, England). 147(4):
|
|
Johansen, M.D., Daher, W., Roquet-Banères, F., Raynaud, C., Alcaraz, M., Maurer, F.P., Kremer, L. (2020) Rifabutin is bactericidal against intracellular and extracellular forms of Mycobacterium abscessus. Antimicrobial Agents and Chemotherapy. 64(11):
|
|
|
Müller, J.S., Burns, D.T., Griffin, H., Wells, G.R., Zendah, R.A., Munro, B., Schneider, C., Horvath, R. (2020) RNA exosome mutations in pontocerebellar hypoplasia alter ribosome biogenesis and p53 levels. Life science alliance. 3(8):
|
Peng, L., Wang, C., Li, P., Cheng, B., Hu, Y., Cheng, Y., Zheng, Q. (2020) Evaluation of hypopigmentation in embryonic zebrafish induced by emerging disinfection byproduct, 3, 5-di-I-tyrosylalanine. Aquatic toxicology (Amsterdam, Netherlands). 225:105525
|
Podobnik, M., Frohnhöfer, H.G., Dooley, C.M., Eskova, A., Nüsslein-Volhard, C., Irion, U. (2020) Evolution of the potassium channel gene Kcnj13 underlies colour pattern diversification in Danio fish. Nature communications. 11:6230
|
Siregar, P., Juniardi, S., Audira, G., Lai, Y.H., Huang, J.C., Chen, K.H., Chen, J.R., Hsiao, C.D. (2020) Method Standardization for Conducting Innate Color Preference Studies in Different Zebrafish Strains. Biomedicines. 8(8):
|
|
Yousaf, S., Sethna, S., Chaudhary, M.A., Shaikh, R.S., Riazuddin, S., Ahmed, Z.M. (2020) Molecular characterization of SLC24A5 variants and evaluation of Nitisinone treatment efficacy in a zebrafish model of OCA6. Pigment cell & melanoma research. 33(4):556-565
|
Zhou, W., Brown, W., Bardhan, A., Delaney, M., Ilk, A., Rauen, R., Kahn, S., Tsang, M., Deiters, A. (2020) Spatiotemporal Control of CRISPR/Cas9 Function in Cells and Zebrafish using Light-Activated Guide RNA. Angewandte Chemie (International ed. in English). 59(23):8998-9003
|
Baeten, J.T., Waarts, M.R., Pruitt, M.M., Chan, W.C., Andrade, J., de Jong, J.L.O. (2019) The side population enriches for leukemia propagating cell activity and Wnt pathway expression in zebrafish acute lymphoblastic leukemia. Haematologica. 104(7):1388-1395
|
Bernut, A., Dupont, C., Ogryzko, N.V., Neyret, A., Herrmann, J.L., Floto, R.A., Renshaw, S.A., Kremer, L. (2019) CFTR Protects against Mycobacterium abscessus Infection by Fine-Tuning Host Oxidative Defenses. Cell Reports. 26:1828-1840.e4
|
Chisholm, D.R., Lamb, R., Pallett, T., Affleck, V., Holden, C., Marrison, J., O'Toole, P., Ashton, P.D., Newling, K., Steffen, A., Nelson, A.K., Mahler, C., Valentine, R., Blacker, T.S., Bain, A.J., Girkin, J., Marder, T.B., Whiting, A., Ambler, C.A. (2019) Photoactivated cell-killing involving a low molecular weight, donor-acceptor diphenylacetylene. Chemical science. 10:4673-4683
|
Lewis, V.M., Saunders, L.M., Larson, T.A., Bain, E.J., Sturiale, S.L., Gur, D., Chowdhury, S., Flynn, J.D., Allen, M.C., Deheyn, D.D., Lee, J.C., Simon, J.A., Lippincott-Schwartz, J., Raible, D.W., Parichy, D.M. (2019) Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores. Proceedings of the National Academy of Sciences of the United States of America. 116(24):11806-11811
|
O'Connor, E., Cairns, G., Spendiff, S., Burns, D., Hettwer, S., Mäder, A., Müller, J., Horvath, R., Slater, C., Roos, A., Lochmüller, H. (2019) Modulation of Agrin and RhoA Pathways Ameliorates Movement Defects and Synapse Morphology in MYO9A-Depleted Zebrafish. Cells. 8(8)
|
Raynaud, C., Daher, W., Johansen, M., Roquet-Baneres, F., Blaise, M., Onajole, O.K., Kozikowski, A., Herrmann, J.L., Dziadek, J., Gobis, K., Kremer, L. (2019) Active benzimidazole derivatives targeting the MmpL3 transporter in Mycobacterium abscessus. ACS infectious diseases. 6(2):324-337
|
Rogasevskaia, T.P., Szerencsei, R.T., Jalloul, A.H., Visser, F., Winkfein, R.J., Schnetkamp, P.P.M. (2019) Cellular localization of the K+ -dependent Na+ -Ca2+ exchanger NCKX5 and the role of the cytoplasmic loop in its distribution in pigmented cells. Pigment cell & melanoma research. 32:55-67
|
Santucci, P., Johansen, M.D., Point, V., Poncin, I., Viljoen, A., Cavalier, J.F., Kremer, L., Canaan, S. (2019) Nitrogen deprivation induces triacylglycerol accumulation, drug tolerance and hypervirulence in mycobacteria. Scientific Reports. 9:8667
|
Follain, G., Osmani, N., Azevedo, A.S., Allio, G., Mercier, L., Karreman, M.A., Solecki, G., Garcia Leòn, M.J., Lefebvre, O., Fekonja, N., Hille, C., Chabannes, V., Dollé, G., Metivet, T., Hovsepian, F., Prudhomme, C., Pichot, A., Paul, N., Carapito, R., Bahram, S., Ruthensteiner, B., Kemmling, A., Siemonsen, S., Schneider, T., Fiehler, J., Glatzel, M., Winkler, F., Schwab, Y., Pantel, K., Harlepp, S., Goetz, J.G. (2018) Hemodynamic Forces Tune the Arrest, Adhesion, and Extravasation of Circulating Tumor Cells. Developmental Cell. 45:33-52.e12
|
|
Jain, R.A., Wolman, M.A., Marsden, K.C., Nelson, J.C., Shoenhard, H., Echeverry, F.A., Szi, C., Bell, H., Skinner, J., Cobbs, E.N., Sawada, K., Zamora, A.D., Pereda, A.E., Granato, M. (2018) A Forward Genetic Screen in Zebrafish Identifies the G-Protein-Coupled Receptor CaSR as a Modulator of Sensorimotor Decision Making. Current biology : CB. 28(9):1357-1369.e5
|
McMacken, G., Cox, D., Roos, A., Müller, J., Whittaker, R., Lochmüller, H. (2018) The Beta-Adrenergic Agonist Salbutamol Modulates Neuromuscular Junction Formation in Zebrafish Models of Human Myasthenic Syndromes. Human molecular genetics. 27(9):1556-1564
|
|
Phan, V., Cox, D., Cipriani, S., Spendiff, S., Buchkremer, S., O'Connor, E., Horvath, R., Goebel, H.H., Hathazi, D., Lochmüller, H., Straka, T., Rudolf, R., Weis, J., Roos, A. (2018) SIL1 deficiency causes degenerative changes of peripheral nerves and neuromuscular junctions in fish, mice and human. Neurobiology of disease. 124:218-229
|
Qian, L., Cui, F., Yang, Y., Liu, Y., Qi, S., Wang, C. (2018) Mechanisms of developmental toxicity in zebrafish embryos (Danio rerio) induced by boscalid. The Science of the total environment. 634:478-487
|
Qian, L., Qi, S., Cao, F., Zhang, J., Li, C., Song, M., Wang, C. (2018) Effects of penthiopyrad on the development and behaviour of zebrafish in early-life stages. Chemosphere. 214:184-194
|
|
Wu, R.S., Lam, I.I., Clay, H., Duong, D.N., Deo, R.C., Coughlin, S.R. (2018) A Rapid Method for Directed Gene Knockout for Screening in G0 Zebrafish. Developmental Cell. 46:112-125.e4
|
Andreiuk, B., Reisch, A., Lindecker, M., Follain, G., Peyriéras, N., Goetz, J.G., Klymchenko, A.S. (2017) Fluorescent Polymer Nanoparticles for Cell Barcoding In Vitro and In Vivo. Small (Weinheim an der Bergstrasse, Germany). 13(38)
|
Dupont, C., Viljoen, A., Thomas, S., Roquet-Banères, F., Herrmann, J.L., Pethe, K., Kremer, L. (2017) Bedaquiline inhibits the ATP synthase in Mycobacterium abscessus and is effective in infected zebrafish. Antimicrobial Agents and Chemotherapy. 61(11)
|
|
Kaslin, J., Kroehne, V., Ganz, J., Hans, S., Brand, M. (2017) Distinct roles of neuroepithelial-like and radial glia-like progenitor cells in cerebellar regeneration. Development (Cambridge, England). 144(8):1462-1471
|
Mesureur, J., Feliciano, J.R., Wagner, N., Gomes, M.C., Zhang, L., Blanco-Gonzalez, M., van der Vaart, M., O'Callaghan, D., Meijer, A.H., Vergunst, A.C. (2017) Macrophages, but not neutrophils, are critical for proliferation of Burkholderia cenocepacia and ensuing host-damaging inflammation. PLoS pathogens. 13:e1006437
|
Moreno-Mateos, M.A., Fernandez, J.P., Rouet, R., Vejnar, C.E., Lane, M.A., Mis, E., Khokha, M.K., Doudna, J.A., Giraldez, A.J. (2017) CRISPR-Cpf1 mediates efficient homology-directed repair and temperature-controlled genome editing. Nature communications. 8:2024
|
Tenente, I.M., Hayes, M.N., Ignatius, M.S., McCarthy, K., Yohe, M., Sindiri, S., Gryder, B., Oliveira, M.L., Ramakrishnan, A., Tang, Q., Chen, E.Y., Petur Nielsen, G., Khan, J., Langenau, D.M. (2017) Myogenic regulatory transcription factors regulate growth in rhabdomyosarcoma. eLIFE. 6
|
Wiessner, M., Roos, A., Munn, C.J., Viswanathan, R., Whyte, T., Cox, D., Schoser, B., Sewry, C., Roper, H., Phadke, R., Marini Bettolo, C., Barresi, R., Charlton, R., Bönnemann, C.G., Abath Neto, O., Reed, U.C., Zanoteli, E., Araújo Martins Moreno, C., Ertl-Wagner, B., Stucka, R., De Goede, C., Borges da Silva, T., Hathazi, D., Dell'Aica, M., Zahedi, R.P., Thiele, S., Müller, J., Kingston, H., Müller, S., Curtis, E., Walter, M.C., Strom, T.M., Straub, V., Bushby, K., Muntoni, F., Swan, L.E., Lochmüller, H., Senderek, J. (2017) Mutations in INPP5K, Encoding a Phosphoinositide 5-Phosphatase, Cause Congenital Muscular Dystrophy with Cataracts and Mild Cognitive Impairment. American journal of human genetics. 100(3):523-536
|
Bell, B.A., Yuan, A., Dicicco, R.M., Fogerty, J., Lessieur, E.M., Perkins, B.D. (2016) The adult zebrafish retina: In vivo optical sectioning with Confocal Scanning Laser Ophthalmoscopy and Spectral-Domain Optical Coherence Tomography. Experimental Eye Research. 153:65-78
|
Bernut, A., Viljoen, A., Dupont, C., Sapriel, G., Blaise, M., Bouchier, C., Brosch, R., de Chastellier, C., Herrmann, J.L., Kremer, L. (2016) Insights into the smooth-to-rough transitioning in Mycobacterium bolletii unravels a functional Tyr residue conserved in all mycobacterial MmpL family members. Molecular Microbiology. 99(5):866-83
|
Burger, A., Lindsay, H., Felker, A., Hess, C., Anders, C., Chiavacci, E., Zaugg, J., Weber, L.M., Catena, R., Jinek, M., Robinson, M.D., Mosimann, C. (2016) Maximizing mutagenesis with solubilized CRISPR-Cas9 ribonucleoprotein complexes. Development (Cambridge, England). 143(11):2025-37
|
Dupont, C., Viljoen, A., Dubar, F., Blaise, M., Bernut, A., Pawlik, A., Bouchier, C., Brosch, R., Guérardel, Y., Lelièvre, J., Ballell, L., Herrmann, J.L., Biot, C., Kremer, L. (2016) A new piperidinol derivative targeting mycolic acid transport in Mycobacterium abscessus. Molecular Microbiology. 101(3):515-29
|
Giunta, M., Edvardson, S., Xu, Y., Schuelke, M., Gomez-Duran, A., Boczonadi, V., Elpeleg, O., Müller, J.S., Horvath, R. (2016) Altered RNA metabolism due to a homozygous RBM7 mutation in a patient with spinal motor neuropathy. Human molecular genetics. 25(14):2985-2996
|
Guillot, R., Muriach, B., Rocha, A., Rotllant, J., Kelsh, R.N., Cerdá-Reverter, J.M. (2016) Thyroid Hormones Regulate Zebrafish Melanogenesis in a Gender-Specific Manner. PLoS One. 11:e0166152
|
Halloum, I., Carrère-Kremer, S., Blaise, M., Viljoen, A., Bernut, A., Le Moigne, V., Vilchèze, C., Guérardel, Y., Lutfalla, G., Herrmann, J.L., Jacobs, W.R., Kremer, L. (2016) Deletion of a dehydratase important for intracellular growth and cording renders rough Mycobacterium abscessus avirulent. Proceedings of the National Academy of Sciences of the United States of America. 113(29):E4228-37
|
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O'Connor, E., Töpf, A., Müller, J.S., Cox, D., Evangelista, T., Colomer, J., Abicht, A., Senderek, J., Hasselmann, O., Yaramis, A., Laval, S.H., Lochmüller, H. (2016) Identification of mutations in the MYO9A gene in patients with congenital myasthenic syndrome. Brain : a journal of neurology. 139(Pt 8):2143-53
|
Paksa, A., Bandemer, J., Hoeckendorf, B., Razin, N., Tarbashevich, K., Minina, S., Meyen, D., Biundo, A., Leidel, S.A., Peyrieras, N., Gov, N.S., Keller, P.J., Raz, E. (2016) Repulsive cues combined with physical barriers and cell-cell adhesion determine progenitor cell positioning during organogenesis. Nature communications. 7:11288
|
Belon, C., Soscia, C., Bernut, A., Laubier, A., Bleves, S., Blanc-Potard, A.B. (2015) A Macrophage Subversion Factor Is Shared by Intracellular and Extracellular Pathogens. PLoS pathogens. 11:e1004969
|
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|
Herrero, A., Pinto, A., Colón-Bolea, P., Casar, B., Jones, M., Agudo-Ibáñez, L., Vidal, R., Tenbaum, S.P., Nuciforo, P., Valdizán, E.M., Horvath, Z., Orfi, L., Pineda-Lucena, A., Bony, E., Keri, G., Rivas, G., Pazos, A., Gozalbes, R., Palmer, H.G., Hurlstone, A., Crespo, P. (2015) Small Molecule Inhibition of ERK Dimerization Prevents Tumorigenesis by RAS-ERK Pathway Oncogenes. Cancer Cell. 28:170-82
|
|
Kizil, C., Iltzsche, A., Thomas, A.K., Bhattarai, P., Zhang, Y., Brand, M. (2015) Efficient cargo delivery into adult brain tissue using short cell-penetrating peptides. PLoS One. 10:e0124073
|
Madgwick, A., Fort, P., Hanson, P.S., Thibault, P., Gaudreau, M.C., Lutfalla, G., Möröy, T., Abou Elela, S., Chaudhry, B., Elliott, D.J., Morris, C.M., Venables, J.P. (2015) Neural Differentiation Modulates the Vertebrate Brain Specific Splicing Program. PLoS One. 10:e0125998
|
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|
Tzung, K.W., Goto, R., Saju, J.M., Sreenivasan, R., Saito, T., Arai, K., Yamaha, E., Hossain, M.S., Calvert, M.E., Orbán, L. (2015) Early Depletion of Primordial Germ Cells in Zebrafish Promotes Testis Formation. Stem Cell Reports. 4(1):61-73
|
|
Al-Hamed, M.H., van Lennep, C., Hynes, A.M., Chrystal, P., Eley, L., Al-Fadhly, F., El Sayed, R., Simms, R.J., Meyer, B., Sayer, J.A. (2014) Functional modelling of a novel mutation in BBS5. Cilia. 3:3
|
|
Bernut, A., Herrmann, J.L., Kissa, K., Dubremetz, J.F., Gaillard, J.L., Lutfalla, G., Kremer, L. (2014) Mycobacterium abscessus cording prevents phagocytosis and promotes abscess formation. Proceedings of the National Academy of Sciences of the United States of America. 111:E943-52
|
Bernut, A., Le Moigne, V., Lesne, T., Lutfalla, G., Herrmann, J.L., Kremer, L. (2014) In vivo assessment of drug efficacy against Mycobacterium abscessus using the embryonic zebrafish test system. Antimicrobial Agents and Chemotherapy. 58(7):4054-4063
|
Boczonadi, V., Müller, J.S., Pyle, A., Munkley, J., Dor, T., Quartararo, J., Ferrero, I., Karcagi, V., Giunta, M., Polvikoski, T., Birchall, D., Princzinger, A., Cinnamon, Y., Lützkendorf, S., Piko, H., Reza, M., Florez, L., Santibanez-Koref, M., Griffin, H., Schuelke, M., Elpeleg, O., Kalaydjieva, L., Lochmüller, H., Elliott, D.J., Chinnery, P.F., Edvardson, S., Horvath, R. (2014) EXOSC8 mutations alter mRNA metabolism and cause hypomyelination with spinal muscular atrophy and cerebellar hypoplasia. Nature communications. 5:4287
|
Chaouch, A., Porcelli, V., Cox, D., Edvardson, S., Scarcia, P., De Grassi, A., Pierri, C.L., Cossins, J., Laval, S.H., Griffin, H., Müller, J.S., Evangelista, T., Töpf, A., Abicht, A., Huebner, A., von der Hagen, M., Bushby, K., Straub, V., Horvath, R., Elpeleg, O., Palace, J., Senderek, J., Beeson, D., Palmieri, L., Lochmüller, H. (2014) Mutations in the Mitochondrial Citrate Carrier SLC25A1 are Associated with Impaired Neuromuscular Transmission. Journal of neuromuscular diseases. 1:75-90
|
|
|
Ganz, J., Kroehne, V., Freudenreich, D., Machate, A., Geffarth, M., Braasch, I., Kaslin, J., Brand, M. (2014) Subdivisions of the adult zebrafish pallium based on molecular marker analysis. F1000Research. 3:308
|
|
Irion, U., Frohnhöfer, H.G., Krauss, J., Çolak Champollion, T., Maischein, H., Geiger-Rudolph, S., Weiler, C., Nüsslein-Volhard, C. (2014) Gap junctions composed of connexions 41.8 and 39.4 are essential for colour pattern formation in zebrafish. eLIFE. 4:1225-38
|
Krauss, J., Frohnhöfer, H.G., Walderich, B., Maischein, H.M., Weiler, C., Irion, U., Nüsslein-Volhard, C. (2014) Endothelin signalling in iridophore development and stripe pattern formation of zebrafish. Biology Open. 3(6):503-9
|
|
Nguyen-Chi, M., Phan, Q.T., Gonzalez, C., Dubremetz, J.F., Levraud, J.P., Lutfalla, G. (2014) Transient infection of the zebrafish notochord with E. coli induces chronic inflammation. Disease models & mechanisms. 7:871-882
|
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|
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|
|
|
Dooley, C.M., Schwarz, H., Mueller, K.P., Mongera, A., Konantz, M., Neuhauss, S.C., Nüsslein-Volhard, C., and Geisler, R. (2013) Slc45a2 and V-ATPase are regulators of melanosomal pH homeostasis in zebrafish, providing a mechanism for human pigment evolution and disease. Pigment cell & melanoma research. 26(2):205-217
|
Gauron, C., Rampon, C., Bouzaffour, M., Ipendey, E., Teillon, J., Volovitch, M., and Vriz, S. (2013) Sustained production of ROS triggers compensatory proliferation and is required for regeneration to proceed. Scientific Reports. 3:2084
|
Gupta, A., Hall, V.L., Kok, F.O., Shin, M., McNulty, J.C., Lawson, N.D., and Wolfe, S.A. (2013) Targeted Chromosomal Deletions and Inversions in Zebrafish. Genome research. 23(6):1008-17
|
|
|
|
|
Adams, M., Simms, R.J., Abdelhamed, Z., Dawe, H.R., Szymanska, K., Logan, C.V., Wheway, G., Pitt, E., Gull, K., Knowles, M.A., Blair, E., Cross, S.H., Sayer, J.A., and Johnson, C.A. (2012) A meckelin-filamin A interaction mediates ciliogenesis. Human molecular genetics. 21(6):1272-1286
|
|
|
Dahlem, T.J., Hoshijima, K., Jurynec, M.J., Gunther, D., Starker, C.G., Locke, A.S., Weis, A.M., Voytas, D.F., and Grunwald, D.J. (2012) Simple Methods for Generating and Detecting Locus-Specific Mutations Induced with TALENs in the Zebrafish Genome. PLoS Genetics. 8(8):e1002861
|
Ganz, J., Kaslin, J., Freudenreich, D., Machate, A., Geffarth, M., and Brand, M. (2012) Subdivisions of the adult zebrafish subpallium by molecular marker analysis. The Journal of comparative neurology. 520(3):633-55
|
Hochmann, S., Kaslin, J., Hans, S., Weber, A., Machate, A., Geffarth, M., Funk, R.H., and Brand, M. (2012) Fgf Signaling is Required for Photoreceptor Maintenance in the Adult Zebrafish Retina. PLoS One. 7(1):e30365
|
|
Kizil, C., Dudczig, S., Kyritsis, N., Machate, A., Blaesche, J., Kroehne, V., and Brand, M. (2012) The chemokine receptor cxcr5 regulates the regenerative neurogenesis response in the adult zebrafish brain. Neural Development. 7(1):27
|
Schaper, W., Bentrop, J., Ustinova, J., Blume, L., Kats, E., Tiralongo, J., Weinhold, B., Bastmeyer, M., and Muenster-Kuehnel, A. (2012) Identification and biochemical characterization of two functional CMP-sialic acid synthetases in Danio rerio. The Journal of biological chemistry. 287(16):13239-13248
|
Simms, R.J., Hynes, A.M., Eley, L., Inglis, D., Chaudhry, B., Dawe, H.R., and Sayer, J.A. (2012) Modelling a ciliopathy: Ahi1 knockdown in model systems reveals an essential role in brain, retinal, and renal development. Cellular and molecular life sciences : CMLS. 69(6):993-1009
|
Tsetskhladze, Z.R., Canfield, V.A., Ang, K.C., Wentzel, S.M., Reid, K.P., Berg, A.S., Johnson, S.L., Kawakami, K., and Cheng, K.C. (2012) Functional assessment of human coding mutations affecting skin pigmentation using zebrafish. PLoS One. 7(10):e47398
|
|
|
|
|
Kroehne, V., Freudenreich, D., Hans, S., Kaslin, J., and Brand, M. (2011) Regeneration of the adult zebrafish brain from neurogenic radial glia-type progenitors. Development (Cambridge, England). 138(22):4831-4841
|
|
|
Parmentier, C., Hameury, E., Dubessy, C., Quan, F.B., Habert, D., Calas, A., Vaudry, H., Lihrmann, I., and Tostivint, H. (2011) Occurrence of Two Distinct Urotensin II-Related Peptides in Zebrafish Provides New Insight into the Evolutionary History of the Urotensin II Gene Family. Endocrinology. 152(6):2330-2341
|
|
|
|
Kawakami, Y., Goto-Kazeto, R., Saito, T., Fujimoto, T., Higaki, S., Takahashi, Y., Arai, K., and Yamaha, E. (2010) Generation of germ-line chimera zebrafish using primordial germ cells isolated from cultured blastomeres and cryopreserved embryoids. The International journal of developmental biology. 54(10):1493-1501
|
|
Smith, A.C., Raimondi, A.R., Salthouse, C.D., Ignatius, M.S., Blackburn, J.S., Mizgirev, I.V., Storer, N.Y., de Jong, J.L., Chen, A.T., Zhou, Y., Revskoy, S., Zon, L.I., and Langenau, D.M. (2010) High-throughput cell transplantation establishes that tumor-initiating cells are abundant in zebrafish T-cell acute lymphoblastic leukemia. Blood. 115(16):3296-3303
|
Kaslin, J., Ganz, J., Geffarth, M., Grandel, H., Hans, S., and Brand, M. (2009) Stem cells in the adult zebrafish cerebellum: initiation and maintenance of a novel stem cell niche. The Journal of neuroscience : the official journal of the Society for Neuroscience. 29(19):6142-6153
|
Nuñez, V.A., Sarrazin, A.F., Cubedo, N., Allende, M.L., Dambly-Chaudière, C., and Ghysen, A. (2009) Postembryonic development of the posterior lateral line in the zebrafish. Evolution & development. 11(4):391-404
|
Wang, Z., Nishimura, Y., Shimada, Y., Umemoto, N., Hirano, M., Zang, L., Oka, T., Sakamoto, C., Kuroyanagi, J., and Tanaka, T. (2009) Zebrafish beta-adrenergic receptor mRNA expression and control of pigmentation. Gene. 446(1):18-27
|
Wittkopp, N., Huntzinger, E., Weiler, C., Saulière, J., Schmidt, S., Sonawane, M., and Izaurralde, E. (2009) Nonsense-mediated mRNA decay effectors are essential for zebrafish embryonic development and survival. Molecular and cellular biology. 29(13):3517-3528
|
|
|
Doyon, Y., McCammon, J.M., Miller, J.C., Faraji, F., Ngo, C., Katibah, G.E., Amora, R., Hocking, T.D., Zhang, L., Rebar, E.J., Gregory, P.D., Urnov, F.D., and Amacher, S.L. (2008) Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat. Biotechnol.. 26(6):702-708
|
|
Brown, S.B., Tucker, C.S., Ford, C., Lee, Y., Dunbar, D.R., and Mullins, J.J. (2007) Class III antiarrhythmic methanesulfonanilides inhibit leukocyte recruitment in zebrafish. Journal of Leukocyte Biology. 82(1):79-84
|
McNeill, M.S., Paulsen, J., Bonde, G., Burnight, E., Hsu, M.Y., and Cornell, R.A. (2007) Cell Death of Melanophores in Zebrafish trpm7 Mutant Embryos Depends on Melanin Synthesis. The Journal of investigative dermatology. 127(8):2020-30
|
Xie, J., Bessling, S.L., Cooper, T.K., Dietz, H.C., McCallion, A.S., and Fisher, S. (2007) Manipulating mitotic recombination in the zebrafish embryo through RecQ helicases. Genetics. 176(2):1339-1342
|
|
|
|
|
Lamason, R.L., Mohideen, M.A., Mest, J.R., Wong, A.C., Norton, H.L., Aros, M.C., Jurynec, M.J., Mao, X., Humphreville, V.R., Humbert, J.E., Sinha, S., Moore, J.L., Jagadeeswaran, P., Zhao, W., Ning, G., Makalowska, I., McKeigue, P.M., O'donnell, D., Kittles, R., Parra, E.J., Mangini, N.J., Grunwald, D.J., Shriver, M.D., Canfield, V.A., and Cheng, K.C. (2005) SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans. Science (New York, N.Y.). 310(5755):1782-1786
|
Cortés, F., Daggett, D., Bryson-Richardson, R.J., Neyt, C., Maule, J., Gautier, P., Hollway, G.E., Keenan, D., and Currie, P.D. (2003) Cadherin-mediated differential cell adhesion controls slow muscle cell migration in the developing zebrafish myotome. Developmental Cell. 5(6):865-876
|
|
|
|
|
|
Miller, C.T., Schilling, T.F., Lee, K., Parker, J., and Kimmel, C.B. (2000) sucker encodes a zebrafish Endothelin-1 required for ventral pharyngeal arch development. Development (Cambridge, England). 127(17):3815-3828
|
Yelon, D., Ticho, B., Halpern, M.E., Ruvinsky, I., Ho, R.K., Silver, L.M., and Stainier, D.Y. (2000) The bHLH transcription factor Hand2 plays parallel roles in zebrafish heart and pectoral fin development. Development (Cambridge, England). 127(12):2573-2582
|
|
|
|
|
|
Neuhauss, S.C.F., Biehlmaier, O., Seeliger, M.W., Das, T., Kohler, K., Harris, W.A., and Baier, H. (1999) Genetic disorders of vision revealed by a behavioral screen of 400 essential loci in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 19(19):8603-8615
|
|
|
|
|
|
|
|
|
Weiland, U.M., Ott, H., Bastmeyer, M., Schaden, H., Giordano, S. and Stürmer, C.A.O. (1997) Expression of an L1-related cell adhesion molecule on developing CNS fiber tracts in zebrafish and its functional contribution to axon fasciculation. Molecular and cellular neurosciences. 9(1):77-89
|
Concordet, J.P., Lewis, K.E., Moore, J.W., Goodrich, L.V., Johnson, R.L., Scott, M.P., and Ingham, P.W. (1996) Spatial regulation of a zebrafish patched homologue reflects the roles of sonic hedgehog and protein kinase A in neural tube and somite patterning. Development (Cambridge, England). 122(9):2835-2846
|
Driever, W., Solnica-Krezel, L., Schier, A.F., Neuhauss, S.C., Malicki, J., Stemple, D.L., Stainier, D.Y., Zwartkruis, F., Abdelilah, S., Rangini, Z., Belak, J., and Boggs, C. (1996) A genetic screen for mutations affecting embryogenesis in zebrafish. Development (Cambridge, England). 123:37-46
|
Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development (Cambridge, England). 123:1-36
|
Haffter, P., Odenthal, J., Mullins, M.C., Lin, S., Farrell, M.J., Vogelsang, E., Haas, F., Brand, M., van Eeden, F.J.M., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Kelsh, R.N., Hopkins, N., and Nüsslein-Volhard, C. (1996) Mutations affecting pigmentation and shape of the adult zebrafish. Development genes and evolution. 206(4):260-276
|
Kelsh, R.N., Brand, M., Jiang, Y.J., Heisenberg, C.P., Lin, S., Haffter, P., Odenthal, J., Mullins, M.C., van Eeden, F.J., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Kane, D.A., Warga, R.M., Beuchle, D., Vogelsang, L., and Nüsslein-Volhard, C. (1996) Zebrafish pigmentation mutations and the processes of neural crest development. Development (Cambridge, England). 123:369-389
|
|
|
van der, Hoeven, F., Sordino, P., Fraudeau, N., Izpisúa Belmonte, J.C., and Duboule, D. (1996) Teleost HoxD and HoxA genes: comparison with tetrapods and functional evolution of the HOXD complex. Mechanisms of Development. 54(1):9-21
|
|
|
Reinhard, E., Nedivi, E., Wegner, J., Skene, J.H.P., and Westerfield, M. (1994) Neural selective activation and temporal regulation of a mammalian GAP-43 promoter in zebrafish. Development (Cambridge, England). 120:1767-1775
|
|
|
|
|
|
|
Molven, A., Wright, C.V.E., BreMiller, R., De Robertis, E.M., and Kimmel, C.B. (1990) Expression of a homeobox gene product in normal and mutant zebrafish embryos: evolution of the tetrapod body plan. Development (Cambridge, England). 109:279-288
|
|
|
|
|
|
|