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ZIRC
ZFIN ID: ZDB-FIG-161121-4
Shan et al., 2016 - Matrix metalloproteinase-9 plays a role in protecting zebrafish from lethal infection with Listeria monocytogenes by enhacing macrophage migration. Fish & shellfish immunology   54:179-87 Full text @ Fish Shellfish Immunol.
ADDITIONAL FIGURES
EXPRESSION / LABELING:
Genes:
Fish:
Condition:
Anatomical Term:
Stage: Day 5
PHENOTYPE:
Fish:
Condition:
Observed In:
Stage: Day 5

Fig. 1 ZFIN is incorporating published figure images and captions as part of an ongoing project. Figures from some publications have not yet been curated, or are not available for display because of copyright restrictions.

Gene Expression Details
Gene Antibody Fish Conditions Stage Anatomy Assay
abracl AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
agt AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
arpc5a AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
c3a.1 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
c9 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
calr3b AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
cdh1 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
cfb AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
coro1a AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
crp AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
fabp7a AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
fga AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
fgg AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
hsp70l AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
irf1b AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
irf7 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
irg1l AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
krt91 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
lyz AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
mhc1uba AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
mmp9 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
mmp13a AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
moxd1 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
mpx AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
scinla AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
serpina7 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
si:dkey-183i3.5 AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
stat1b AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
timp2b AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
tuba8l AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism RTPCR
Antibody Labeling Details No data available
Phenotype Details
Fish Conditions Stage Phenotype
AB bacterial treatment by exposure to environment: Listeria monocytogenes EGD-e, germ free Day 5 whole organism krt91 expression decreased amount, abnormal
Day 5 whole organism si:dkey-183i3.5 expression decreased amount, abnormal
Day 5 whole organism fabp7a expression decreased amount, abnormal
Day 5 whole organism scinla expression decreased amount, abnormal
Day 5 whole organism cdh1 expression increased amount, abnormal
Day 5 whole organism cfb expression increased amount, abnormal
Day 5 whole organism lyz expression increased amount, abnormal
Day 5 whole organism mmp9 expression increased amount, abnormal
Day 5 whole organism mpx expression increased amount, abnormal
Day 5 whole organism tuba8l expression increased amount, abnormal
Day 5 whole organism agt expression increased amount, abnormal
Day 5 whole organism mmp13a expression increased amount, abnormal
Day 5 whole organism mhc1uba expression increased amount, abnormal
Day 5 whole organism irf7 expression increased amount, abnormal
Day 5 whole organism c9 expression increased amount, abnormal
Day 5 whole organism calr3b expression increased amount, abnormal
Day 5 whole organism crp expression increased amount, abnormal
Day 5 whole organism arpc5a expression increased amount, abnormal
Day 5 whole organism hsp70l expression increased amount, abnormal
Day 5 whole organism serpina7 expression increased amount, abnormal
Day 5 whole organism irg1l expression increased amount, abnormal
Day 5 whole organism stat1b expression increased amount, abnormal
Day 5 whole organism moxd1 expression increased amount, abnormal
Day 5 whole organism abracl expression increased amount, abnormal
Day 5 whole organism fga expression increased amount, abnormal
Day 5 whole organism fgg expression increased amount, abnormal
Day 5 whole organism coro1a expression increased amount, abnormal
Day 5 whole organism c3a.1 expression increased amount, abnormal
Day 5 whole organism timp2b expression increased amount, abnormal
Day 5 whole organism irf1b expression increased amount, abnormal
Full text @ Fish Shellfish Immunol.