header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-041114-13
Gene Name: interferon regulatory factor 1b
Gene Symbol: irf1b
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: irf11 (2), irf1 (1), sb:eu922, zgc:103566

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits transcription regulatory region DNA binding activity. Involved in regulation of defense response to virus and response to virus. Localizes to the nucleus. Human ortholog(s) of this gene  ...
GENE EXPRESSION
All Expression Data: 10 figures from 9 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu922]
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb81 Indel Exon 1 Unknown CRISPR
ihb85 Insertion Unknown Unknown
ihb112 Indel Exon 1 Splice Site CRISPR
la014106Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37387 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH irf1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    lung cancer Nonsmall cell lung cancer, somatic 211980
    stomach cancer Gastric cancer, somatic 613659
    Myelogenous leukemia, acute
    Myelodysplastic syndrome, preleukemic
    DISEASE ASSOCIATED WITH irf1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of defense response to virus (more)
    Cellular Component nucleus (more)
    Molecular Function protein binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA irf1b-201 (1) 1894
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM irf1b No data available
    MARKER RELATIONSHIPS
    irf1bContained in: [BAC] CH211-25G7 (1) (order this)
    irf1bEncodes: [EST] eu922 (1)
    [cDNA] MGC:103566 (1) (order this), MGC:192360 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205747 (1) 1967bp
    Genomic GenBank:CU302316 (1) 166312bp
    Select Tool
    Polypeptide UniProtKB:B5DDP2 (1) 287aa
    Sequence Clusters UniGene:119956 (1)
    Sequence Information (all 21)
    OTHER irf1b GENE PAGES
  • Alliance (1)
  • Gene:792160 (1)
  • VEGA:OTTDARG00000034844 (1)
  • ORTHOLOGY for irf1b (Chr: 21)
    CITATIONS (55)