ZFIN

ZFIN ID: ZDB-GENE-030616-200

ZFIN ID: ZDB-GENE-030616-200

CITATIONS (62 total)

Gene Name:	T cell receptor alpha constant
Gene Symbol:	trac

Chen, W., Wu, J., She, P., Li, J., Lan, Y., Hu, X., Huangfu, Y., Wu, C., Jin, D., Xie, P., Zhuang, G., Wu, Y., Zhang, Y., Zon, L.I., Zhu, P., Zhong, T.P. (2025) ATF7IP/SETDB1-mediated epigenetic programming regulates thymic homing and T lymphopoiesis of hematopoietic progenitors during embryogenesis. Nature communications. 16:65506550

Sobah, M.L., Liongue, C., Ward, A.C. (2024) Stat3 regulates developmental hematopoiesis and impacts myeloid cell function via canonical and non-canonical modalities. Journal of Innate Immunity. 16(1):262-282

Awasthi, N., Ward, A.C., Liongue, C. (2023) Analysis of Potential Non-Canonical or Alternate STAT5 Functions in Immune Development and Growth. Frontiers in bioscience (Landmark edition). 28:187187

Cardoso, B.A., Duque, M., Gírio, A., Fragoso, R., Oliveira, M.L., Allen, J.R., Martins, L.R., Correia, N.C., Silveira, A.B., Veloso, A., Kimura, S., Demoen, L., Matthijssens, F., Jeha, S., Cheng, C., Pui, C.H., Grosso, A.R., Neto, J.L., De Almeida, S.F., Van Vlieberghe, P., Mullighan, C.G., Yunes, J.A., Langenau, D.M., Pflumio, F., Barata, J.T. (2023) CASZ1 upregulates PI3K-AKT-mTOR signaling and promotes T-cell acute lymphoblastic leukemia. Haematologica. 109(6):1713-1725

Heidary, S., Awasthi, N., Page, N., Allnutt, T., Lewis, R.S., Liongue, C., Ward, A.C. (2023) A zebrafish model of growth hormone insensitivity syndrome with immune dysregulation 1 (GHISID1). Cellular and molecular life sciences : CMLS. 80:109109

Sobah, M.L., Scott, A.C., Laird, M., Koole, C., Liongue, C., Ward, A.C. (2023) Socs3b regulates the development and function of innate immune cells in zebrafish. Frontiers in immunology. 14:11197271119727

Amanda, S., Tan, T.K., Ong, J.Z.L., Theardy, M.S., Wong, R.W.J., Huang, X.Z., Ali, M.Z., Li, Y., Gong, Z., Inagaki, H., Foo, E.Y., Pang, B., Tan, S.Y., Iida, S., Sanda, T. (2022) IRF4 drives clonal evolution and lineage choice in a zebrafish model of T-cell lymphoma. Nature communications. 13:2420

Basheer, F., Bulleeraz, V., Ngo, V.Q.T., Liongue, C., Ward, A.C. (2022) In vivo impact of JAK3 A573V mutation revealed using zebrafish. Cellular and molecular life sciences : CMLS. 79:322

Basheer, F., Lee, E., Liongue, C., Ward, A.C. (2022) Zebrafish Model of Severe Combined Immunodeficiency (SCID) Due to JAK3 Mutation. Biomolecules. 12(10):

Oliveira, M.L., Veloso, A., Garcia, E.G., Iyer, S., Pereira, C., Barreto, V.M., Langenau, D.M., Barata, J.T. (2022) Mutant IL7R collaborates with MYC to induce T-cell acute lymphoblastic leukemia. Leukemia. 36(6):1533-1540

Sertori, R., Jones, R., Basheer, F., Rivera, L., Dawson, S., Loke, S., Heidary, S., Dhillon, A., Liongue, C., Ward, A.C. (2022) Generation and Characterization of a Zebrafish IL-2Rγc SCID Model. International Journal of Molecular Sciences. 23(4):

Taznin, T., Perera, K., Gibert, Y., Ward, A.C., Liongue, C. (2022) Cytokine Receptor-Like Factor 3 (CRLF3) Contributes to Early Zebrafish Hematopoiesis. Frontiers in immunology. 13:910428

Limonta, G., Mancia, A., Abelli, L., Fossi, M.C., Caliani, I., Panti, C. (2021) Effects of microplastics on head kidney gene expression and enzymatic biomarkers in adult zebrafish. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 245:109037

Cornet, V., Douxfils, J., Mandiki, S.N.M., Kestemont, P. (2020) Early-life infection with a bacterial pathogen increases expression levels of innate immunity related genes during adulthood in zebrafish. Developmental and comparative immunology. 108:103672

Jerison, E.R., Quake, S.R. (2020) Heterogeneous T cell motility behaviors emerge from a coupling between speed and turning in vivo. eLIFE. 9:

Kernen, L., Rieder, J., Duus, A., Holbech, H., Segner, H., Bailey, C. (2020) Thymus development in the zebrafish (Danio rerio) from an ecoimmunology perspective. Journal of experimental zoology. Part A, Ecological and integrative physiology. 333(10):805-819

Lv, P., Ma, D., Gao, S., Zhang, Y., Bae, Y.K., Liang, G., Gao, S., Choi, J.H., Kim, C.H., Wang, L., Liu, F. (2020) Generation of foxn1/Casper Mutant Zebrafish for Allograft and Xenograft of Normal and Malignant Cells. Stem Cell Reports. 15(3):749-760

Leong, W.Z., Tan, S.H., Ngoc, P.C.T., Amanda, S., Yam, A.W.Y., Liau, W.S., Gong, Z., Lawton, L.N., Tenen, D.G., Sanda, T. (2018) ARID5B as a critical downstream target of the TAL1 complex that activates the oncogenic transcriptional program and promotes T-cell leukemogenesis. Genes & Development. 31(23-24):2343-2360

Hui, S.P., Sheng, D.Z., Sugimoto, K., Gonzalez-Rajal, A., Nakagawa, S., Hesselson, D., Kikuchi, K. (2017) Zebrafish Regulatory T Cells Mediate Organ-Specific Regenerative Programs. Developmental Cell. 43:659-672.e5

Liu, W., Wu, M., Huang, Z., Lian, J., Chen, J., Wang, T., Leung, A.Y., Liao, Y., Zhang, Z., Liu, Q., Yen, K., Lin, S., Zon, L.I., Wen, Z., Zhang, Y., Zhang, W. (2017) c-myb hyperactivity leads to myeloid and lymphoid malignancies in zebrafish. Leukemia. 31(1):222-233

Tian, Y., Xu, J., Feng, S., He, S., Zhao, S., Zhu, L., Jin, W., Dai, Y., Luo, L., Qu, J.Y., Wen, Z. (2017) The first wave of T lymphopoiesis in zebrafish arises from aorta endothelium independent of hematopoietic stem cells. The Journal of experimental medicine. 214(11):3347-3360

Wan, F., Hu, C.B., Ma, J.X., Gao, K., Xiang, L.X., Shao, J.Z. (2017) Characterization of γδ T Cells from Zebrafish Provides Insights into Their Important Role in Adaptive Humoral Immunity. Frontiers in immunology. 7:675

Zhang, Z., Liu, W., Zhao, L., Huang, Z., Chen, X., Ma, N., Xu, J., Zhang, W., Zhang, Y. (2017) Retinoblastoma 1 protects T cell maturation from premature apoptosis by inhibiting E2F1. Development (Cambridge, England). 145(1)

Covacu, R., Philip, H., Jaronen, M., Almeida, J., Kenison, J.E., Darko, S., Chao, C.C., Yaari, G., Louzoun, Y., Carmel, L., Douek, D.C., Efroni, S., Quintana, F.J. (2016) System-wide Analysis of the T Cell Response. Cell Reports. 14(11):2733-44

Dee, C.T., Nagaraju, R.T., Athanasiadis, E.I., Gray, C., Fernandez Del Ama, L., Johnston, S.A., Secombes, C.J., Cvejic, A., Hurlstone, A.F. (2016) CD4-Transgenic Zebrafish Reveal Tissue-Resident Th2- and Regulatory T Cell-like Populations and Diverse Mononuclear Phagocytes. Journal of immunology (Baltimore, Md. : 1950). 197(9):3520-3530

Miyazawa, R., Matsuura, Y., Shibasaki, Y., Imamura, S., Nakanishi, T. (2016) Cross-reactivity of monoclonal antibodies against CD4-1 and CD8α of ginbuna crucian carp with lymphocytes of zebrafish and other cyprinid species. Developmental and comparative immunology. 80:15-23

Moore, F.E., Garcia, E.G., Lobbardi, R., Jain, E., Tang, Q., Moore, J.C., Cortes, M., Molodtsov, A., Kasheta, M., Luo, C.C., Garcia, A.J., Mylvaganam, R., Yoder, J.A., Blackburn, J.S., Sadreyev, R.I., Ceol, C.J., North, T.E., Langenau, D.M. (2016) Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish. The Journal of experimental medicine. 213(6):979-92

Moore, J.C., Mulligan, T.S., Torres Yordán, N., Castranova, D., Pham, V.N., Tang, Q., Lobbardi, R., Anselmo, A., Liwski, R.S., Berman, J.N., Sadreyev, R.I., Weinstein, B.M., Langenau, D.M. (2016) T cell immune deficiency in zap70 mutant zebrafish. Molecular and cellular biology. 36(23):2868-2876

Seelye, S.L., Chen, P.L., Deiss, T.C., Criscitiello, M.F. (2016) Genomic organization of the zebrafish (Danio rerio) T cell receptor alpha/delta locus and analysis of expressed products. Immunogenetics. 68(5):365-79

Sertori, R., Liongue, C., Basheer, F., Lewis, K.L., Rasighaemi, P., de Coninck, D., Traver, D., Ward, A.C. (2016) Conserved IL-2Rγc Signaling Mediates Lymphopoiesis in Zebrafish. Journal of immunology (Baltimore, Md. : 1950). 196(1):135-43

Svoboda, O., Stachura, D.L., Machonova, O., Zon, L.I., Traver, D., Bartunek, P. (2016) Ex vivo tools for the clonal analysis of zebrafish hematopoiesis. Nature Protocols. 11:1007-1020

Wang, S., He, Q., Ma, D., Xue, Y., Liu, F. (2015) Irf4 Regulates the Choice between T Lymphoid-Primed Progenitor and Myeloid Lineage Fates during Embryogenesis. Developmental Cell. 34(6):621-31

Yoon, S., Mitra, S., Wyse, C., Alnabulsi, A., Zou, J., Weerdenburg, E.M., van der Sar, A.M., Wang, D., Secombes, C.J., Bird, S. (2015) First Demonstration of Antigen Induced Cytokine Expression by CD4-1+ Lymphocytes in a Poikilotherm: Studies in Zebrafish (Danio rerio). PLoS One. 10:e0126378

Blackburn, J.S., Liu, S., Wilder, J.L., Dobrinski, K.P., Lobbardi, R., Moore, F.E., Martinez, S.A., Chen, E.Y., Lee, C., Langenau, D.M. (2014) Clonal evolution enhances leukemia-propagating cell frequency in T cell acute lymphoblastic leukemia through Akt/mTORC1 pathway activation. Cancer Cell. 25:366-78

Kortum, A.N., Rodriguez-Nunez, I., Yang, J., Shim, J., Runft, D., O'Driscoll, M.L., Haire, R.N., Cannon, J.P., Turner, P.M., Litman, R.T., Kim, C.H., Neely, M.N., Litman, G.W., and Yoder, J.A. (2014) Differential expression and ligand binding indicate alternative functions for zebrafish polymeric immunoglobulin receptor (pIgR) and a family of pIgR-like (PIGRL) proteins. Immunogenetics. 66(4):267-279

Lewis, R.S., Noor, S.M., Fraser, F.W., Sertori, R., Liongue, C., Ward, A.C. (2014) Regulation of Embryonic Hematopoiesis by a Cytokine-Inducible SH2 Domain Homolog in Zebrafish. Journal of immunology (Baltimore, Md. : 1950). 192(12):5739-48

Presslauer, C., Nagasawa, K., Dahle, D., Babiak, J., Fernandes, J.M., Babiak, I. (2014) Induced Autoimmunity against Gonadal Proteins Affects Gonadal Development in Juvenile Zebrafish. PLoS One. 9:e114209

Tang, Q., Abdelfattah, N.S., Blackburn, J.S., Moore, J.C., Martinez, S.A., Moore, F.E., Lobbardi, R., Tenente, I.M., Ignatius, M.S., Berman, J.N., Liwski, R.S., Houvras, Y., Langenau, D.M. (2014) Optimized cell transplantation using adult rag2 mutant zebrafish. Nature Methods. 11(8):821-4

Wei, N., Pang, W., Wang, Y., Xiong, Y., Xu, R., Wu, W., Zhao, C., and Yang, G. (2014) Knockdown of PU.1 mRNA and AS lncRNA regulates expression of immune-related genes in zebrafish Danio rerio. Developmental and comparative immunology. 44(2):315-319

Yang, D., Liu, Q., Ni, C., Li, S., Wu, H., Wang, Q., Xiao, J., and Zhang, Y. (2013) Gene expression profiling in live attenuated Edwardsiella tarda vaccine immunized and challenged zebrafish: Insights into the basic mechanisms of protection seen in immunized fish. Developmental and comparative immunology. 40(2):132-41

Li, F., Zhang, S., Wang, Z., and Li, H. (2011) Genes of the adaptive immune system are expressed early in zebrafish larval development following lipopolysaccharide stimulation. Chinese Journal of Oceanology and Limnology. 29(2):326-333

Wittamer, V., Bertrand, J.Y., Gutschow, P.W., and Traver, D. (2011) Characterization of the mononuclear phagocyte system in zebrafish. Blood. 117(26):7126-7135

Gill, J.A., Lowe, L., Nguyen, J., Liu, P.P., Blake, T., Venkatesh, B., and Aplan, P.D. (2010) Enforced expression of simian virus 40 large T-antigen leads to testicular germ cell tumors in zebrafish. Zebrafish. 7(4):333-341

Phennicie, R.T., Sullivan, M.J., Singer, J.T., Yoder, J.A., and Kim, C.H. (2010) Specific Resistance to Pseudomonas aeruginosa Infection in Zebrafish is Mediated by the Cystic Fibrosis Transmembrane Conductance Regulator. Infection and Immunity. 78(11):4542-4550

Yoder, J.A., Turner, P.M., Wright, P.D., Wittamer, V., Bertrand, J.Y., Traver, D., and Litman, G.W. (2010) Developmental and tissue-specific expression of NITRs. Immunogenetics. 62(2):117-122

Moss, L.D., Monette, M.M., Jaso-Friedmann, L., Leary, J.H. 3rd, Dougan, S.T., Krunkosky, T., and Evans, D.L. (2009) Identification of phagocytic cells, NK-like cytotoxic cell activity and the production of cellular exudates in the coelomic cavity of adult zebrafish. Developmental and comparative immunology. 33(10):1077-1087

Petrie-Hanson, L., Hohn, C., and Hanson, L. (2009) Characterization of rag1 mutant zebrafish leukocytes. BMC immunology. 10:8

Takizawa, F., Araki, K., Ito, K., Moritomo, T., and Nakanishi, T. (2007) Expression analysis of two Eomesodermin homologues in zebrafish lymphoid tissues and cells. Molecular immunology. 44(9):2324-2331

Wei, S., Zhou, J.M., Chen, X., Shah, R.N., Liu, J., Orcutt, T.M., Traver, D., Djeu, J.Y., Litman, G.W., and Yoder, J.A. (2007) The zebrafish activating immune receptor Nitr9 signals via Dap12. Immunogenetics. 59(10):813-821

Yoder, J.A., Orcutt, T.M., Traver, D., and Litman, G.W. (2007) Structural characteristics of zebrafish orthologs of adaptor molecules that associate with transmembrane immune receptors. Gene. 401(1-2):154-164

Sabaawy, H.E., Azuma, M., Embree, L.J., Tsai, H.J., Starost, M.F., and Hickstein, D.D. (2006) TEL-AML1 transgenic zebrafish model of precursor B cell acute lymphoblastic leukemia. Proceedings of the National Academy of Sciences of the United States of America. 103(41):15166-15171

Lam, S.H., Sin, Y.M., Gong, Z., and Lam, T.J. (2005) Effects of thyroid hormone on the development of immune system in zebrafish. General and comparative endocrinology. 142(3):325-335

Langenau, D.M., Feng, H., Berghmans, S., Kanki, J.P., Kutok, J.L., and Look, A.T. (2005) Cre/lox-regulated transgenic zebrafish model with conditional myc-induced T cell acute lymphoblastic leukemia. Proceedings of the National Academy of Sciences of the United States of America. 102(17):6068-6073

Danilova, N., Hohman, V.S., Sacher, F., Ota, T., Willett, C.E., and Steiner, L.A. (2004) T cells and the thymus in developing zebrafish. Developmental and comparative immunology. 28(7-8):755-767

Lam, S.H., Chua, H.L., Gong, Z., Lam, T.J., and Sin, Y.M. (2004) Development and maturation of the immune system in zebrafish, Danio rerio: a gene expression profiling, in situ hybridization and immunological study. Developmental and comparative immunology. 28(1):9-28

Haire, R.N., Rast, J.P., Litman, R.T., and Litman, G.W. (2000) Characterization of three isotypes of immunoglobulin light chains and T-cell antigen receptor a in zebrafish. Immunogenetics. 51(11):915-923

Additional Citations (6):

ZFIN Staff (2019) Semi-automated association of ENSDARG and ENSDART identifiers with ZFIN genes and transcripts. Semi-automated Curation.

ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.

ZFIN Staff (2007) Microarray Expression to Gene Association in ZFIN. Semi-automated Curation.

ZFIN Staff (2003) Curation of VEGA Database Links. Automated Data Submission.

ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.

ZFIN Staff (2002) Curation of EMBL records. Automated Data Submission.