Research
Search
Genes / Clones
Expression
Mutants / Tg
Antibodies
Anatomy / GO / Human Disease / Chemical
Publications
Data Mining
Downloads
Data Model
AllianceMine
BioMart
Genomics
BLAST
ZFIN
Ensembl
NCBI
UCSC
Genome Browsers
ZFIN
Ensembl
Vega
GRC
UCSC
NCBI
Resources
Zebrafish Genomics
Other Genome Databases
Resources
General
The Zebrafish Book
Protocol Wiki
Antibody Wiki
Anatomy Atlases
Resources for Students and Educators
Zebrafish Programs
ZF-Health
Husbandry Resources
More...
Resource Centers
Zebrafish International Resource Center (ZIRC)
China Zebrafish Resource Center (CZRC)
European Zebrafish Resource Center (EZRC)
Community
Announcements
News
Meetings
Jobs
Alliance Community Forum
Search
People
Labs
Companies
Societies
International Zebrafish Society (IZFS)
Zebrafish Disease Models Society (ZDMS)
Genetics Society of America (GSA)
Zebrafish Husbandry Association
Support
Nomenclature
Nomenclature Conventions
Line Designations
Wild-Type Lines
Submit a Proposed Gene Name
Submit a Proposed Mutant/Tg Line Name
Publications
Guidelines for Authors
Zebrashare
Citing ZFIN
Using ZFIN
Help & Tips
Glossary
Single Box Search Help
Submit Data
Terms of Use
About Us
About ZFIN
Contact Information
Statistics
Committees
Jobs at ZFIN
Sign In
Figure Gallery
Expression Pattern Search Results for
sox9a
(126 figures with expression from 94 publications)
Publication
Data
Fish
Condition
Stage Range
Anatomy
Kara
et al.
, 2017
Fig. 4
AB
AB + MO2-mir27a
standard conditions
control
Long-pec
ethmoid cartilage
pharyngeal arch
pharyngeal arch 1
pharyngeal arch 2
Kasper
et al.
, 2017
Fig. 4
AB
dre-mir-24-4
ya327/ya327
; la116Tg
mir24-1
ya324/ya324
; la116Tg
mir24-2
ya325/ya325
; la116Tg
mir24-3
ya326/ya326
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-1
ya324/ya324
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-2
ya325/ya325
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-3
ya326/ya326
; la116Tg
mir24-1
ya324/ya324
; mir24-2
ya325/ya325
; la116Tg
mir24-3
ya326/ya326
; mir24-1
ya324/ya324
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-1
ya324/ya324
; mir24-2
ya325/ya325
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-3
ya326/ya326
; mir24-1
ya324/ya324
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-3
ya326/ya326
; mir24-2
ya325/ya325
; la116Tg
mir24-3
ya326/ya326
; mir24-1
ya324/ya324
; mir24-2
ya325/ya325
; la116Tg
dre-mir-24-4
ya327/ya327
; mir24-3
ya326/ya326
; mir24-1
ya324/ya324
; mir24-2
ya325/ya325
; la116Tg
control
Long-pec
head chondroblast
Ling
et al.
, 2017
Fig. 7
WT
wls
c186/c186
standard conditions
Day 4
Meckel's cartilage
Santos-Ledo
et al.
, 2017
Fig. 1
WT
kif5ba
ae12/ae12
; kif5bb
ae24/ae24
standard conditions
Long-pec
mandibular arch skeleton chondrocyte
Schwarzer
et al.
, 2017
Fig. 3
AB
foxi1
em1/em1
Df(Chr12:dlx3b, dlx4b)tud70/tud70 (AB)
foxi1
em1/em1
; Df(Chr12:dlx3b, dlx4b)tud70/tud70 (AB)
standard conditions
1-4 somites
otic placode
Yan
et al.
, 2017
Fig. 5
AB
gsdf
b1279/b1279
standard conditions
Adult
ovary
testis
Barske
et al.
, 2016
Fig. 3
WT
jag1b
b1105/b1105
standard conditions
Prim-25
to
Long-pec
pharyngeal arch
Fig. 7
WT
prrx1a
el558/el558
; prrx1b
el491/el491
standard conditions
control
Long-pec
pharyngeal arch
McCarthy
et al.
, 2016
Fig. 5
AB
fgf8a
ti282a/ti282a
AB + MO2-fgf3 + MO3-fgf3
control
Prim-5
chondroblast
Fig. 11
AB
control
chemical treatment: Cyclopamine
Prim-5
chondroblast
neurocranium posterior region
Nishioka
et al.
, 2016
Fig. 1
AB
standard conditions
Protruding-mouth
to
Day 4
chondrocyte
Askary
et al.
, 2015
Fig. 1
WT
Df(Chr01:hand2)s6/s6
edn1
tf216b/tf216b
kat6a
b719/b719
kca4Tg
el49Tg; kca4Tg
standard conditions
heat shock
Long-pec
pharyngeal arch 2 chondrocyte
Bhatia
et al.
, 2015
Fig. 5
WIK/AB
control
Long-pec
to
Day 4
ceratobranchial cartilage
ceratohyal cartilage
hyosymplectic cartilage
palatoquadrate arch
pharyngeal arch 2
pharyngeal arch 3
pharyngeal arch 4
pharyngeal arch 5
Fig. 6
WIK/AB
control
Protruding-mouth
to
Day 4
ceratobranchial cartilage
Meckel's cartilage
palatoquadrate arch
Jackson
et al.
, 2015
Fig. 7
AB
AB + MO2-wnt9b
standard conditions
control
Long-pec
ethmoid cartilage
pharyngeal arch 1
Kim
et al.
, 2015
Fig. 4
WT
WT + MO3-esrra + MO4-esrra
standard conditions
control
Long-pec
to
Protruding-mouth
pharyngeal arch 3-7
Fig. 1
WT
standard conditions
Long-pec
to
Protruding-mouth
pharyngeal arch
Lou
et al.
, 2015
Fig. 3
WT
med14
s231/s231
smarca4a
s481/s481
med14
s231/s231
; smarca4a
s481/s481
standard conditions
control
Prim-5
pharyngeal arch
Wu
et al.
, 2015
Fig. 5
AB
AB + MO1-wls
standard conditions
control
Day 4
chondrocyte
cranial cartilage
Chen
et al.
, 2014
Fig. 4
WT
WT + MO2-foxd3 + MO3-foxd3 + MO4-tfap2a
standard conditions
standard conditions
Long-pec
ceratobranchial cartilage
ceratohyal cartilage
hyosymplectic cartilage
Meckel's cartilage
neurocranium
palatoquadrate cartilage
pharyngeal arch cartilage
Le Pabic
et al.
, 2014
Fig. 7
rerea
tb210/tb210
rerea
tb210/+
rerea
tb210/+
+ MO1-dchs2
rerea
tb210/+
+ MO1-fat3a
rerea
tb210/tb210
+ MO1-fat3a
standard conditions
standard conditions
standard conditions
Pec-fin
Meckel's cartilage
palatoquadrate cartilage
Fig. 6
WT
rerea
tb210/tb210
WT + MO1-dchs2
WT + MO1-fat3a
standard conditions
standard conditions
standard conditions
Pec-fin
Meckel's cartilage
palatoquadrate cartilage
Li
et al.
, 2014
Fig. 5
WT
WT + MO1-adarb1a
WT + MO1-gria2a
WT + MO2-adarb1a
standard conditions
standard conditions
standard conditions
control
standard conditions
Prim-5
forebrain
hindbrain
pharyngeal arch
Quintana
et al.
, 2014
Fig. 4
WT
WT + MO1-hcfc1b + MO4-tp53
standard conditions
standard conditions
Protruding-mouth
splanchnocranium
Zhao
et al.
, 2014
Fig. 1
WT
wdr43
tft001/tft001
standard conditions
5-9 somites
neural crest
« previous
1
2
3
4
5
6
next »
Modify your search
Gene/EST
Fish
Target Gene
Author
Anatomy Terms
Include substructures
Between stages
Zygote:1-cell
Cleavage:2-cell
Cleavage:4-cell
Cleavage:8-cell
Cleavage:16-cell
Cleavage:32-cell
Cleavage:64-cell
Blastula:128-cell
Blastula:256-cell
Blastula:512-cell
Blastula:1k-cell
Blastula:High
Blastula:Oblong
Blastula:Sphere
Blastula:Dome
Blastula:30%-epiboly
Gastrula:50%-epiboly
Gastrula:Germ-ring
Gastrula:Shield
Gastrula:75%-epiboly
Gastrula:90%-epiboly
Gastrula:Bud
Segmentation:1-4 somites
Segmentation:5-9 somites
Segmentation:10-13 somites
Segmentation:14-19 somites
Segmentation:20-25 somites
Segmentation:26+ somites
Pharyngula:Prim-5
Pharyngula:Prim-15
Pharyngula:Prim-25
Pharyngula:High-pec
Hatching:Long-pec
Hatching:Pec-fin
Larval:Protruding-mouth
Larval:Day 4
Larval:Day 5
Larval:Day 6
Larval:Days 7-13
Larval:Days 14-20
Larval:Days 21-29
Juvenile:Days 30-44
Juvenile:Days 45-89
Adult
&
Zygote:1-cell
Cleavage:2-cell
Cleavage:4-cell
Cleavage:8-cell
Cleavage:16-cell
Cleavage:32-cell
Cleavage:64-cell
Blastula:128-cell
Blastula:256-cell
Blastula:512-cell
Blastula:1k-cell
Blastula:High
Blastula:Oblong
Blastula:Sphere
Blastula:Dome
Blastula:30%-epiboly
Gastrula:50%-epiboly
Gastrula:Germ-ring
Gastrula:Shield
Gastrula:75%-epiboly
Gastrula:90%-epiboly
Gastrula:Bud
Segmentation:1-4 somites
Segmentation:5-9 somites
Segmentation:10-13 somites
Segmentation:14-19 somites
Segmentation:20-25 somites
Segmentation:26+ somites
Pharyngula:Prim-5
Pharyngula:Prim-15
Pharyngula:Prim-25
Pharyngula:High-pec
Hatching:Long-pec
Hatching:Pec-fin
Larval:Protruding-mouth
Larval:Day 4
Larval:Day 5
Larval:Day 6
Larval:Days 7-13
Larval:Days 14-20
Larval:Days 21-29
Juvenile:Days 30-44
Juvenile:Days 45-89
Adult
Developmental Staging Series
Assay
Any
mRNA in situ hybridization
Northern blot
Immunohistochemistry
Western blot
Reverse transcription PCR
RNA Seq
Intrinsic fluorescence
Nuclease protection assay
Primer extension
cDNA clones
other
Mass Spectrometry
Gene Product Function
Show only WT expression
Show only reporter genes in transgenic fish
Show only figures with images
Show only direct submission data
Show only published literature
Show all
Search
Reset
Your Input Welcome
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Name:
Institution:
Email address:
Please leave blank:
Subject:
Comments:
Send your comments
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.