ZFIN

ZFIN ID: ZDB-GENE-991105-4

ZFIN ID: ZDB-GENE-991105-4

CITATIONS (131 total)

Gene Name:	gap junction protein alpha 1b
Gene Symbol:	gja1b

Ablooglu, A.J., Kang, J., Handin, R.I., Traver, D., and Shattil, S.J. (2007) The zebrafish vitronectin receptor: Characterization of integrin alphaV and beta3 expression patterns in early vertebrate development. Developmental Dynamics : an official publication of the American Association of Anatomists. 236(8):2268-2276
Anbalagan, S., Gordon, L., Blechman, J., Matsuoka, R.L., Rajamannar, P., Wircer, E., Biran, J., Reuveny, A., Leshkowitz, D., Stainier, D.Y.R., Levkowitz, G. (2018) Pituicyte Cues Regulate the Development of Permeable Neuro-Vascular Interfaces. Developmental Cell. 47(6):711-726.e5
Banerji, R., Eble, D.M., Iovine, M.K., Skibbens, R.V. (2016) Esco2 regulates cx43 expression during skeletal regeneration in the zebrafish fin. Developmental Dynamics : an official publication of the American Association of Anatomists. 245(1):7-21
Banerji, R., Skibbens, R.V., Iovine, M.K. (2017) Cohesin mediates Esco2-dependent transcriptional regulation in zebrafish regenerating fin model of Roberts syndrome. Biology Open. 6(12):1802-1813
Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
Bergen, D.J.M., Tong, Q., Shukla, A., Newham, E., Zethof, J., Lundberg, M., Ryan, R., Youlten, S.E., Frysz, M., Croucher, P.I., Flik, G., Richardson, R.J., Kemp, J.P., Hammond, C.L., Metz, J.R. (2022) Regenerating zebrafish scales express a subset of evolutionary conserved genes involved in human skeletal disease. BMC Biology. 20:21
Bhadra, J., Iovine, M.K. (2015) Hsp47 mediates Cx43-dependent skeletal growth and patterning in the regenerating fin. Mechanisms of Development. 138 Pt 3:364-74
Bhattacharya, S., Gargiulo, D., Iovine, M.K. (2018) Simplet-dependent regulation of β-catenin signaling influences skeletal patterning downstream of Cx43. Development (Cambridge, England). 145(23):
Bhattacharya, S., Hyland, C., Falk, M.M., Iovine, M.K. (2020) Connexin43 gap junctional intercellular communication inhibits evx1 expression and joint formation in regenerating fins. Development (Cambridge, England). 147(13):
Brown, A.M., Fisher, S., and Iovine, M.K. (2009) Osteoblast maturation occurs in overlapping proximal-distal compartments during fin regeneration in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 238(11):2922-2928
Burczyk, M.S., Burkhalter, M.D., Tena, T.C., Grisanti, L.A., Kauk, M., Matysik, S., Donow, C., Kustermann, M., Rothe, M., Cui, Y., Raad, F., Laue, S., Moretti, A., Zimmermann, W.H., Wess, J., Kühl, M., Hoffmann, C., Tilley, D.G., Philipp, M. (2019) Muscarinic receptors promote pacemaker fate at the expense of secondary conduction system tissue in zebrafish. JCI insight. 4(20):
Cechmanek, P.B., McFarlane, S. (2017) Retinal pigment epithelium expansion around the neural retina occurs in two separate phases with distinct mechanisms. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(8):598-609
Chatterjee, B., Chin, A.J., Valdimarsson, G., Finis, C., Sonntag, J.M., Choi, B.Y., Tao, L., Balasubramanian, K., Bell, C., Krufka, A., Kozlowski, D.J., Johnson, R.G., and Lo, C.W. (2005) Developmental regulation and expression of the zebrafish connexin43 gene. Developmental Dynamics : an official publication of the American Association of Anatomists. 233(3):890-906
Chatterjee, B., Li, Y.X., Zdanowicz, M., Sonntag, J.M., Chin, A.J., Kozlowski, D.J., Valdimarsson, G., Kirby, M.L., and Lo, C.W. (2001) Analysis of Cx43alpha1 promoter function in the developing zebrafish embryo. Cell adhesion and communication. 8(4-6):289-292
Cheng, S., Christie, T., and Valdimarsson, G. (2003) Expression of connexin48.5, connexin44.1, and connexin43 during zebrafish (Danio rerio) lens development. Developmental Dynamics : an official publication of the American Association of Anatomists. 228(4):709-715
Chi, N.C., Bussen, M., Brand-Arzamendi, K., Ding, C., Olgin, J.E., Shaw, R.M., Martin, G.R., and Stainier, D.Y. (2010) Cardiac conduction is required to preserve cardiac chamber morphology. Proceedings of the National Academy of Sciences of the United States of America. 107(33):14662-14667
Chi, N.C., Shaw, R.M., Jungblut, B., Huisken, J., Ferrer, T., Arnaout, R., Scott, I., Beis, D., Xiao, T., Baier, H., Jan, L.Y., Tristani-Firouzi, M., and Stainier, D.Y. (2008) Genetic and Physiologic Dissection of the Vertebrate Cardiac Conduction System. PLoS Biology. 6(5):e109
Chiang, D.Y., Verkerk, A.O., Victorio, R., Shneyer, B.I., van der Vaart, B., Jouni, M., Narendran, N., Kc, A., Sampognaro, J.R., Vetrano-Olsen, F., Oh, J.S., Buys, E., de Jonge, B., Shah, D.A., Kiviniemi, T., Burridge, P.W., Bezzina, C.R., Akhmanova, A., MacRae, C.A. (2023) The Role of MAPRE2 and Microtubules in Maintaining Normal Ventricular Conduction. Circulation research. 134(1):46-59
Crespo, D., Assis, L.H.C., Zhang, Y.T., Safian, D., Furmanek, T., Skaftnesmo, K.O., Norberg, B., Ge, W., Choi, Y.C., den Broeder, M.J., Legler, J., Bogerd, J., Schulz, R.W. (2021) Insulin-like 3 affects zebrafish spermatogenic cells directly and via Sertoli cells. Communications biology. 4:204
Cruciani, V., and Mikalsen, S.O. (2007) Evolutionary selection pressure and family relationships among connexin genes. Biological chemistry. 388(3):253-264
Daane, J.M., Lanni, J., Rothenberg, I., Seebohm, G., Higdon, C.W., Johnson, S.L., Harris, M.P. (2018) Bioelectric-calcineurin signaling module regulates allometric growth and size of the zebrafish fin. Scientific Reports. 8:10391
Dardis, G., Tryon, R., Ton, Q., Johnson, S.L., Iovine, M.K. (2017) Cx43 suppresses evx1 expression to regulate joint initiation in the regenerating fin. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(9):691-699
Dermietzel, R., Kremer, M., Paputsoglu, G., Stang, A., Skerrett, I.M., Gomès, D., Srinivas, M., Janssen-Bienhold, U., Weiler, R., Nicholson, B.J., Bruzzone, R., and Spray, D.C. (2000) Molecular and functional diversity of neural connexins in the retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20(22):8331-8343
Eastman, S.D., Chen, T.H., Falk, M.M., Mendelson, T.C., and Iovine, M.K. (2006) Phylogenetic analysis of three complete gap junction gene families reveals lineage-specific duplications and highly supported gene classes. Genomics. 87(2):265-274
Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
Esain, V., Postlethwait, J.H., Charnay, P., and Ghislain, J. (2010) FGF-receptor signalling controls neural cell diversity in the zebrafish hindbrain by regulating olig2 and sox9. Development (Cambridge, England). 137(1):33-42
Fadeev, A., Krauss, J., Frohnhöfer, H.G., Irion, U., Nüsslein-Volhard, C. (2015) Tight junction protein 1a regulates pigment cell organisation during zebrafish colour patterning. eLIFE. 4
Farnsworth, D., Posner, M., Miller, A. (2021) Single cell transcriptomics of the developing zebrafish lens and identification of putative controllers of lens development. Experimental Eye Research. 206:108535
Farnsworth, D.R., Saunders, L.M., Miller, A.C. (2020) A single-cell transcriptome atlas for zebrafish development. Developmental Biology. 459(2):100-108
Fukuda, R., Gunawan, F., Beisaw, A., Jimenez-Amilburu, V., Maischein, H.M., Kostin, S., Kawakami, K., Stainier, D.Y. (2017) Proteolysis regulates cardiomyocyte maturation and tissue integration. Nature communications. 8:14495
Gerhart, S.V., Jefferis, R., and Iovine, M.K. (2009) Cx40.8, a Cx43-like protein, forms gap junction channels inefficiently and may require Cx43 for its association at the plasma membrane. FEBS letters. 583(21):3419-3424
Go, W., and Korzh, V. (2013) Plasma membrane Ca(2+) ATPase Atp2b1a regulates bone mineralization in zebrafish. Bone. 54(1):48-57
Govindan, J., and Iovine, M.K. (2014) Hapln1a is required for connexin43-dependent growth and patterning in the regenerating fin skeleton. PLoS One. 9(2):e88574
Govindan, J., Tun, K.M., Iovine, M.K. (2016) Cx43-Dependent Skeletal Phenotypes Are Mediated by Interactions between the Hapln1a-ECM and Sema3d during Fin Regeneration. PLoS One. 11:e0148202
Gumm, J.M., Snekser, J.L., and Iovine, M.K. (2009) Fin-mutant female zebrafish (Danio rerio) exhibit differences in association preferences for male fin length. Behavioural processes. 80(1):35-38
Guzzolino, E., Chiavacci, E., Ahuja, N., Mariani, L., Evangelista, M., Ippolito, C., Rizzo, M., Garrity, D., Cremisi, F., Pitto, L. (2018) Post-transcriptional Modulation of Sphingosine-1-Phosphate Receptor 1 by miR-19a Affects Cardiovascular Development in Zebrafish. Frontiers in cell and developmental biology. 6:58
Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development (Cambridge, England). 123:1-36
Haffter, P., Odenthal, J., Mullins, M.C., Lin, S., Farrell, M.J., Vogelsang, E., Haas, F., Brand, M., van Eeden, F.J.M., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Kelsh, R.N., Hopkins, N., and Nüsslein-Volhard, C. (1996) Mutations affecting pigmentation and shape of the adult zebrafish. Development genes and evolution. 206(4):260-276
Harper, M., Hu, Y., Donahue, J., Acosta, B., Dievenich Braes, F., Nguyen, S., Zeng, J., Barbaro, J., Lee, H., Bui, H., McMenamin, S.K. (2023) Thyroid hormone regulates proximodistal patterning in fin rays. Proceedings of the National Academy of Sciences of the United States of America. 120:e2219770120e2219770120
Hatler, J.M., Essner, J.J., and Johnson, R.G. (2009) A gap junction connexin is required in the vertebrate left-right organizer. Developmental Biology. 336(2):183-191
Henke, K., Daane, J.M., Hawkins, M.B., Dooley, C.M., Busch-Nentwich, E.M., Stemple, D.L., Harris, M.P. (2017) Genetic Screen for Postembryonic Development in the Zebrafish (Danio rerio): Dominant Mutations Affecting Adult Form.. Genetics. 207(2):609-623
Hofsteen, P., Robitaille, A.M., Strash, N., Palpant, N., Moon, R.T., Pabon, L., Murry, C.E. (2018) ALPK2 Promotes Cardiogenesis in Zebrafish and Human Pluripotent Stem Cells. iScience. 2:88-100
Hoptak-Solga, A.D., Klein, K.A., Derosa, A.M., White, T.W., and Iovine, M.K. (2007) Zebrafish short fin mutations in connexin43 lead to aberrant gap junctional intercellular communication. FEBS letters. 581(17):3297-3302
Hoptak-Solga, A.D., Nielsen, S., Jain, I., Thummel, R., Hyde, D.R., and Iovine, M.K. (2008) Connexin43 (GJA1) is required in the population of dividing cells during fin regeneration. Developmental Biology. 317(2):541-548
Hulsey, C.D., Fraser, G.J., Meyer, A. (2016) Biting into the Genome to Phenome Map: Developmental Genetic Modularity of Cichlid Fish Dentitions. Integrative and Comparative Biology. 56(3):373-88
Hyland, C., Mfarej, M., Hiotis, G., Lancaster, S., Novak, N., Iovine, M.K., Falk, M.M. (2021) Impaired Cx43 gap junction endocytosis causes morphological and functional defects in zebrafish. Molecular biology of the cell. 32(20):ar13
Iovine, M.K. and Johnson, S.L. (2000) Genetic analysis of isometric growth control mechanisms in the zebrafish caudal fin. Genetics. 155(3):1321-1329
Iovine, M.K., Gumpert, A.M., Falk, M.M., and Mendelson, T.C. (2008) Cx23, a connexin with only four extracellular-loop cysteines, forms functional gap junction channels and hemichannels. FEBS letters. 582(2):165-170
Iovine, M.K., Higgins, E.P., Hindes, A., Coblitz, B., and Johnson, S.L. (2005) Mutations in connexin43 (GJA1) perturb bone growth in zebrafish fins. Developmental Biology. 278(1):208-219
Itzkowitz, M., and Iovine, M.K. (2007) Single gene mutations causing exaggerated fins also cause non-genetic changes in the display behavior of male zebrafish. Behaviour. 144(7):787-795
Jang, J.Y., Liang, T., Kim, M.K., Kang, K.W., Lee, B., Choi, S.Y. (2022) A Rapid and Noninvasive Method That Extracts Polymerase Chain Reaction-Ready Genomic DNA from Adult Zebrafish. Zebrafish. 19(4):160-164
Jiang, Q., Liu, D., Sun, S., Hu, J., Tan, L., Wang, Y., Gui, Y., Yu, M., and Song, H. (2010) Critical role of connexin43 in zebrafish late primitive and definitive hematopoiesis. Fish physiology and biochemistry. 36(4):945-951
Johnson, S.L. and Bennett, P. (1999) Growth control in the ontogenetic and regenerating zebrafish fin. In The Zebrafish: Biology. H.W. Detrich, L.I. Zon, and M. Westerfield, eds. Methods Cell Biol.. 59:301-311
Kondo, M., Kimura, K., Kobayashi-Sun, J., Yamamori, S., Taniguchi, M., Traver, D., Kobayashi, I. (2023) The sinusoidal hematopoietic niche is formed by Jam1a via Notch signaling in the zebrafish kidney. iScience. 26:106508106508
Kujawski, S., Lin, W., Kitte, F., Börmel, M., Fuchs, S., Arulmozhivarman, G., Vogt, S., Theil, D., Zhang, Y., Antos, C.L. (2014) Calcineurin regulates coordinated outgrowth of zebrafish regenerating fins. Developmental Cell. 28:573-87
Lange, C., Rost, F., Machate, A., Reinhardt, S., Lesche, M., Weber, A., Kuscha, V., Dahl, A., Rulands, S., Brand, M. (2020) Single cell sequencing of radial glia progeny reveals diversity of newborn neurons in the adult zebrafish brain. Development (Cambridge, England). 147(1):
Liu, J., Li, W., Jin, X., Lin, F., Han, J., Zhang, Y. (2023) Optimal tagging strategies for illuminating expression profiles of genes with different abundance in zebrafish. Communications biology. 6:13001300
Liu, R.Z., Denovan-Wright, E.M., Degrave, A., Thisse, C., Thisse, B., and Wright, J.M. (2004) Differential expression of duplicated genes for brain-type fatty acid-binding proteins (fabp7a and fabp7b) during early development of the CNS in zebrafish (Danio rerio). Gene expression patterns : GEP. 4(4):379-387
Lu, J.K., Tsai, T.C., Lee, H., Hsia, K., Lin, C.H., Lu, J.H. (2019) Pectoral Fin Anomalies in tbx5a Knockdown Zebrafish Embryos Related to the Cascade Effect of N-Cadherin and Extracellular Matrix Formation. Journal of developmental biology. 7(3)
Lukowicz-Bedford, R.M., Farnsworth, D.R., Miller, A.C. (2022) Connexinplexity: The spatial and temporal expression of connexin genes during vertebrate organogenesis. G3 (Bethesda). 12(5):
Marchal, G.A., Jouni, M., Chiang, D.Y., Pérez-Hernández Duran, M., Podliesna, S., Yu, N., Casini, S., Potet, F., Veerman, C.C., Klerk, M., Lodder, E.M., Mengarelli, I., Guan, K., Vanoye, C.G., Rothenberg, E., Charpentier, F., Redon, R., George, A., Verkerk, A.O., Bezzina, C.R., MacRae, C.A., Burridge, P., Delmar, M., Galjart, N.J., Portero, V., Remme, C.A. (2021) Targeting the Microtubule EB1-CLASP2 Complex Modulates Na_V1.5 at Intercalated Discs. Circulation research. 129(3):349-365
Meng, J., Xu, W.Y., Chen, X., Lin, T., Deng, X.Y. (2018) Gene locations may contribute to predicting gene regulatory relationships. Journal of Zhejiang University. Science. B. 19:25-37
Mikalsen, S.O., Tausen, M., Í Kongsstovu, S. (2020) Phylogeny of teleost connexins reveals highly inconsistent intra- and interspecies use of nomenclature and misassemblies in recent teleost chromosome assemblies. BMC Genomics. 21:223
Mirbahai, L., Williams, T.D., Zhan, H., Gong, Z., and Chipman, J.K. (2011) Comprehensive profiling of zebrafish hepatic proximal promoter CpG island methylation and its modification during chemical carcinogenesis. BMC Genomics. 12:3
Misu, A., Yamanaka, H., Aramaki, T., Kondo, S., Skerrett, I.M., Iovine, M.K., Watanabe, M. (2016) Two different functions of Connexin43 confer two different bone phenotypes in zebrafish. The Journal of biological chemistry. 291(24):12601-11
Morais, R.D., Nóbrega, R.H., Gómez-González, N.E., Schmidt, R., Bogerd, J., França, L.R., and Schulz, R.W. (2013) Thyroid Hormone Stimulates the Proliferation of Sertoli Cells and Single Type A Spermatogonia in Adult Zebrafish (Danio rerio) Testis. Endocrinology. 154(11):4365-76
Palpant, N.J., Hofsteen, P., Pabon, L., Reinecke, H., Murry, C.E. (2015) Cardiac Development in Zebrafish and Human Embryonic Stem Cells Is Inhibited by Exposure to Tobacco Cigarettes and E-Cigarettes. PLoS One. 10:e0126259
Panáková, D., Werdich, A.A., and MacRae, C.A. (2010) Wnt11 patterns a myocardial electrical gradient through regulation of the L-type Ca(2+) channel. Nature. 466(7308):874-878
Park, D.J., Freitas, T.A., Wallick, C.J., Guyette, C.V., and Warn-Cramer, B.J. (2006) Molecular dynamics and in vitro analysis of Connexin43: A new 14-3-3 mode-1 interacting protein. Protein science : a publication of the Protein Society. 15(10):2344-2355
Perathoner, S., Daane, J.M., Henrion, U., Seebohm, G., Higdon, C.W., Johnson, S.L., Nüsslein-Volhard, C., and Harris, M.P. (2014) Bioelectric signaling regulates size in zebrafish fins. PLoS Genetics. 10(1):e1004080
Poplimont, H., Georgantzoglou, A., Boulch, M., Walker, H.A., Coombs, C., Papaleonidopoulou, F., Sarris, M. (2020) Neutrophil Swarming in Damaged Tissue Is Orchestrated by Connexins and Cooperative Calcium Alarm Signals. Current biology : CB. 30(14):2761-2776.e7
Rabinowitz, J.S., Robitaille, A.M., Wang, Y., Ray, C.A., Thummel, R., Gu, H., Djukovic, D., Raftery, D., Berndt, J.D., Moon, R.T. (2017) Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 114(5):E717-E726
Rattka, M., Westphal, S., Gahr, B.M., Just, S., Rottbauer, W. (2021) Spen deficiency interferes with Connexin 43 expression and leads to heart failure in zebrafish. Journal of Molecular and Cellular Cardiology. 155:25-35
Rodrigues, M.S., Tovo-Neto, A., Rosa, I.F., Doretto, L.B., Fallah, H.P., Habibi, H.R., Nóbrega, R.H. (2022) Thyroid Hormones Deficiency Impairs Male Germ Cell Development: A Cross Talk Between Hypothalamic-Pituitary-Thyroid, and-Gonadal Axes in Zebrafish. Frontiers in cell and developmental biology. 10:865948
Schuster, K., Leeke, B., Meier, M., Wang, Y., Newman, T., Burgess, S., Horsfield, J.A. (2015) A neural crest origin for cohesinopathy heart defects. Human molecular genetics. 24(24):7005-16
Seaver, A.W., Weaver, N.S., Iovine, M.K. (2023) Retinoic Acid Influences connexin43 Expression During Joint Formation in the Regenerating Zebrafish Fin. Bioelectricity. 5:173180173-180
Sharma, P., Abbasi, C., Lazic, S., Teng, A.C., Wang, D., Dubois, N., Ignatchenko, V., Wong, V., Liu, J., Araki, T., Tiburcy, M., Ackerley, C., Zimmermann, W.H., Hamilton, R., Sun, Y., Liu, P.P., Keller, G., Stagljar, I., Scott, I.C., Kislinger, T., Gramolini, A.O. (2015) Evolutionarily conserved intercalated disc protein Tmem65 regulates cardiac conduction and connexin 43 function. Nature communications. 6:8391
Sims Jr, K., Eble, D.M., and Iovine, M.K. (2009) Connexin43 regulates joint location in zebrafish fins. Developmental Biology. 327(2):410-418
Song, Y., Chen, W., Zhu, B., Ge, W. (2022) Disruption of Epidermal Growth Factor Receptor but Not EGF Blocks Follicle Activation in Zebrafish Ovary. Frontiers in cell and developmental biology. 9:750888
Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
Tang, H., Chen, Y., Wang, L., Yin, Y., Li, G., Guo, Y., Liu, Y., Lin, H., Cheng, C.H.K., Liu, X. (2017) Fertility impairment with defective spermatogenesis and steroidogenesis in male zebrafish lacking androgen receptor. Biology of reproduction. 98(2):227-238
Thi Thu, H.N., Haw Tien, S.F., Loh, S.L., Bok Yan, J.S., and Korzh, V. (2013) tbx2a Is Required for Specification of Endodermal Pouches during Development of the Pharyngeal Arches. PLoS One. 8(10):e77171
Thompson, J.D., Ou, J., Lee, N., Shin, K., Cigliola, V., Song, L., Crawford, G.E., Kang, J., Poss, K.D. (2020) Identification and requirements of enhancers that direct gene expression during zebrafish fin regeneration. Development (Cambridge, England). 147(14):
Ton, Q.V., and Iovine, M.K. (2013) Identification of an evx1-Dependent Joint-Formation Pathway during FIN Regeneration. PLoS One. 8(11):e81240
Ton, Q.V., and Iovine, M.K. (2012) Semaphorin3d mediates Cx43-dependent phenotypes during fin regeneration. Developmental Biology. 366(2):195-203
Usui, Y., Aramaki, T., Kondo, S., Watanabe, M. (2019) The minimal gap-junction network among melanophores and xanthophores required for stripe-pattern formation in zebrafish. Development (Cambridge, England). 146(22):
Völkers, M., Dolatabadi, N., Gude, N., Most, P., Sussman, M.A., and Hassel, D. (2012) Orai1 deficiency leads to heart failure and skeletal myopathy in zebrafish. Journal of Cell Science. 125(2):287-294
Wang, J., Wu, Y., Zhao, F., Wu, Y., Dong, W., Zhao, J., Zhu, Z., Liu, D. (2015) Fgf-signaling-dependent sox9a and atoh1a regulate otic neural development in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35:234-44
Watanabe, M., Sawada, R., Aramaki, T., Skerrett, I.M., Kondo, S. (2016) The physiological characterization of Connexin41.8 and Connexin39.4, which are involved in the stripe pattern formation of zebrafish. The Journal of biological chemistry. 291(3):1053-63
Watanabe, M., Watanabe, D., and Kondo, S. (2012) Polyamine sensitivity of gap junctions is required for skin pattern formation in zebrafish. Scientific Reports. 2:473
Wiweger, M.I., Zhao, Z., van Merkesteyn, R.J., Roehl, H.H., and Hogendoornm, P.C. (2012) HSPG-Deficient Zebrafish Uncovers Dental Aspect of Multiple Osteochondromas. PLoS One. 7(1):e29734
Woods, I.G., Wilson, C., Friedlander, B., Chang, P., Reyes, D.K., Nix, R., Kelly, P.D., Chu, F., Postlethwait, J.H., and Talbot, W.S. (2005) The zebrafish gene map defines ancestral vertebrate chromosomes. Genome research. 15(9):1307-1314
Yin, V.P., Lepilina, A., Smith, A., and Poss, K.D. (2012) Regulation of zebrafish heart regeneration by miR-133. Developmental Biology. 365(2):319-327
Zhang, J., Chandrasekaran, G., Li, W., Kim, D.Y., Jeong, I.Y., Lee, S.H., Liang, T., Bae, J.Y., Choi, I., Kang, H., Maeng, J.S., Kim, M.K., Lee, T., Park, S.W., Kim, M.J., Kim, H.S., Ro, H., Bae, Y.C., Park, H.C., Choi, E.Y., Choi, S.Y. (2020) Wnt-PLC-IP₃-Connexin-Ca²⁺ axis maintains ependymal motile cilia in zebrafish spinal cord. Nature communications. 11:1860
Zhang, Y., Cui, F.Z., Wang, X.M., Feng, Q.L., and Zhu, X.D. (2002) Mechanical properties of skeletal bone in gene-mutated stöpsel^dtl28d and wild-type zebrafish (Danio rerio) measured by atomic force microscopy-based nanoindentation. Bone. 30(4):541-546
Zhang, Y., Ji, D., Li, L., Yang, S., Zhang, H., Duan, X. (2019) ClC-7 Regulates the Pattern and Early Development of Craniofacial Bone and Tooth. Theranostics. 9:1387-1400
Zhang, Y., Liu, Y., Qin, W., Zheng, S., Xiao, J., Xia, X., Yuan, X., Zeng, J., Shi, Y., Zhang, Y., Ma, H., Varshney, G.K., Fei, J.F., Liu, Y. (2024) Cytosine base editors with increased PAM and deaminase motif flexibility for gene editing in zebrafish. Nature communications. 15:95269526
Zoidl, G., Kremer, M., Zoidl, C., Bunse, S., and Dermietzel, R. (2008) Molecular diversity of connexin and pannexin genes in the retina of the zebrafish Danio rerio. Cell communication & adhesion. 15(1):169-183

Zhang, Y., Liu, Y., Qin, W., Zheng, S., Xiao, J., Xia, X., Yuan, X., Zeng, J., Shi, Y., Zhang, Y., Ma, H., Varshney, G.K., Fei, J.F., Liu, Y. (2024) Cytosine base editors with increased PAM and deaminase motif flexibility for gene editing in zebrafish. Nature communications. 15:95269526
Chiang, D.Y., Verkerk, A.O., Victorio, R., Shneyer, B.I., van der Vaart, B., Jouni, M., Narendran, N., Kc, A., Sampognaro, J.R., Vetrano-Olsen, F., Oh, J.S., Buys, E., de Jonge, B., Shah, D.A., Kiviniemi, T., Burridge, P.W., Bezzina, C.R., Akhmanova, A., MacRae, C.A. (2023) The Role of MAPRE2 and Microtubules in Maintaining Normal Ventricular Conduction. Circulation research. 134(1):46-59
Harper, M., Hu, Y., Donahue, J., Acosta, B., Dievenich Braes, F., Nguyen, S., Zeng, J., Barbaro, J., Lee, H., Bui, H., McMenamin, S.K. (2023) Thyroid hormone regulates proximodistal patterning in fin rays. Proceedings of the National Academy of Sciences of the United States of America. 120:e2219770120e2219770120
Kondo, M., Kimura, K., Kobayashi-Sun, J., Yamamori, S., Taniguchi, M., Traver, D., Kobayashi, I. (2023) The sinusoidal hematopoietic niche is formed by Jam1a via Notch signaling in the zebrafish kidney. iScience. 26:106508106508
Liu, J., Li, W., Jin, X., Lin, F., Han, J., Zhang, Y. (2023) Optimal tagging strategies for illuminating expression profiles of genes with different abundance in zebrafish. Communications biology. 6:13001300
Seaver, A.W., Weaver, N.S., Iovine, M.K. (2023) Retinoic Acid Influences connexin43 Expression During Joint Formation in the Regenerating Zebrafish Fin. Bioelectricity. 5:173180173-180
Bergen, D.J.M., Tong, Q., Shukla, A., Newham, E., Zethof, J., Lundberg, M., Ryan, R., Youlten, S.E., Frysz, M., Croucher, P.I., Flik, G., Richardson, R.J., Kemp, J.P., Hammond, C.L., Metz, J.R. (2022) Regenerating zebrafish scales express a subset of evolutionary conserved genes involved in human skeletal disease. BMC Biology. 20:21
Jang, J.Y., Liang, T., Kim, M.K., Kang, K.W., Lee, B., Choi, S.Y. (2022) A Rapid and Noninvasive Method That Extracts Polymerase Chain Reaction-Ready Genomic DNA from Adult Zebrafish. Zebrafish. 19(4):160-164
Lukowicz-Bedford, R.M., Farnsworth, D.R., Miller, A.C. (2022) Connexinplexity: The spatial and temporal expression of connexin genes during vertebrate organogenesis. G3 (Bethesda). 12(5):
Rodrigues, M.S., Tovo-Neto, A., Rosa, I.F., Doretto, L.B., Fallah, H.P., Habibi, H.R., Nóbrega, R.H. (2022) Thyroid Hormones Deficiency Impairs Male Germ Cell Development: A Cross Talk Between Hypothalamic-Pituitary-Thyroid, and-Gonadal Axes in Zebrafish. Frontiers in cell and developmental biology. 10:865948
Song, Y., Chen, W., Zhu, B., Ge, W. (2022) Disruption of Epidermal Growth Factor Receptor but Not EGF Blocks Follicle Activation in Zebrafish Ovary. Frontiers in cell and developmental biology. 9:750888
Crespo, D., Assis, L.H.C., Zhang, Y.T., Safian, D., Furmanek, T., Skaftnesmo, K.O., Norberg, B., Ge, W., Choi, Y.C., den Broeder, M.J., Legler, J., Bogerd, J., Schulz, R.W. (2021) Insulin-like 3 affects zebrafish spermatogenic cells directly and via Sertoli cells. Communications biology. 4:204
Farnsworth, D., Posner, M., Miller, A. (2021) Single cell transcriptomics of the developing zebrafish lens and identification of putative controllers of lens development. Experimental Eye Research. 206:108535
Hyland, C., Mfarej, M., Hiotis, G., Lancaster, S., Novak, N., Iovine, M.K., Falk, M.M. (2021) Impaired Cx43 gap junction endocytosis causes morphological and functional defects in zebrafish. Molecular biology of the cell. 32(20):ar13
Marchal, G.A., Jouni, M., Chiang, D.Y., Pérez-Hernández Duran, M., Podliesna, S., Yu, N., Casini, S., Potet, F., Veerman, C.C., Klerk, M., Lodder, E.M., Mengarelli, I., Guan, K., Vanoye, C.G., Rothenberg, E., Charpentier, F., Redon, R., George, A., Verkerk, A.O., Bezzina, C.R., MacRae, C.A., Burridge, P., Delmar, M., Galjart, N.J., Portero, V., Remme, C.A. (2021) Targeting the Microtubule EB1-CLASP2 Complex Modulates Na_V1.5 at Intercalated Discs. Circulation research. 129(3):349-365
Rattka, M., Westphal, S., Gahr, B.M., Just, S., Rottbauer, W. (2021) Spen deficiency interferes with Connexin 43 expression and leads to heart failure in zebrafish. Journal of Molecular and Cellular Cardiology. 155:25-35
Bhattacharya, S., Hyland, C., Falk, M.M., Iovine, M.K. (2020) Connexin43 gap junctional intercellular communication inhibits evx1 expression and joint formation in regenerating fins. Development (Cambridge, England). 147(13):
Farnsworth, D.R., Saunders, L.M., Miller, A.C. (2020) A single-cell transcriptome atlas for zebrafish development. Developmental Biology. 459(2):100-108
Lange, C., Rost, F., Machate, A., Reinhardt, S., Lesche, M., Weber, A., Kuscha, V., Dahl, A., Rulands, S., Brand, M. (2020) Single cell sequencing of radial glia progeny reveals diversity of newborn neurons in the adult zebrafish brain. Development (Cambridge, England). 147(1):
Mikalsen, S.O., Tausen, M., Í Kongsstovu, S. (2020) Phylogeny of teleost connexins reveals highly inconsistent intra- and interspecies use of nomenclature and misassemblies in recent teleost chromosome assemblies. BMC Genomics. 21:223
Poplimont, H., Georgantzoglou, A., Boulch, M., Walker, H.A., Coombs, C., Papaleonidopoulou, F., Sarris, M. (2020) Neutrophil Swarming in Damaged Tissue Is Orchestrated by Connexins and Cooperative Calcium Alarm Signals. Current biology : CB. 30(14):2761-2776.e7
Thompson, J.D., Ou, J., Lee, N., Shin, K., Cigliola, V., Song, L., Crawford, G.E., Kang, J., Poss, K.D. (2020) Identification and requirements of enhancers that direct gene expression during zebrafish fin regeneration. Development (Cambridge, England). 147(14):
Zhang, J., Chandrasekaran, G., Li, W., Kim, D.Y., Jeong, I.Y., Lee, S.H., Liang, T., Bae, J.Y., Choi, I., Kang, H., Maeng, J.S., Kim, M.K., Lee, T., Park, S.W., Kim, M.J., Kim, H.S., Ro, H., Bae, Y.C., Park, H.C., Choi, E.Y., Choi, S.Y. (2020) Wnt-PLC-IP₃-Connexin-Ca²⁺ axis maintains ependymal motile cilia in zebrafish spinal cord. Nature communications. 11:1860
Burczyk, M.S., Burkhalter, M.D., Tena, T.C., Grisanti, L.A., Kauk, M., Matysik, S., Donow, C., Kustermann, M., Rothe, M., Cui, Y., Raad, F., Laue, S., Moretti, A., Zimmermann, W.H., Wess, J., Kühl, M., Hoffmann, C., Tilley, D.G., Philipp, M. (2019) Muscarinic receptors promote pacemaker fate at the expense of secondary conduction system tissue in zebrafish. JCI insight. 4(20):
Lu, J.K., Tsai, T.C., Lee, H., Hsia, K., Lin, C.H., Lu, J.H. (2019) Pectoral Fin Anomalies in tbx5a Knockdown Zebrafish Embryos Related to the Cascade Effect of N-Cadherin and Extracellular Matrix Formation. Journal of developmental biology. 7(3)
Usui, Y., Aramaki, T., Kondo, S., Watanabe, M. (2019) The minimal gap-junction network among melanophores and xanthophores required for stripe-pattern formation in zebrafish. Development (Cambridge, England). 146(22):
Zhang, Y., Ji, D., Li, L., Yang, S., Zhang, H., Duan, X. (2019) ClC-7 Regulates the Pattern and Early Development of Craniofacial Bone and Tooth. Theranostics. 9:1387-1400
Anbalagan, S., Gordon, L., Blechman, J., Matsuoka, R.L., Rajamannar, P., Wircer, E., Biran, J., Reuveny, A., Leshkowitz, D., Stainier, D.Y.R., Levkowitz, G. (2018) Pituicyte Cues Regulate the Development of Permeable Neuro-Vascular Interfaces. Developmental Cell. 47(6):711-726.e5
Bhattacharya, S., Gargiulo, D., Iovine, M.K. (2018) Simplet-dependent regulation of β-catenin signaling influences skeletal patterning downstream of Cx43. Development (Cambridge, England). 145(23):
Daane, J.M., Lanni, J., Rothenberg, I., Seebohm, G., Higdon, C.W., Johnson, S.L., Harris, M.P. (2018) Bioelectric-calcineurin signaling module regulates allometric growth and size of the zebrafish fin. Scientific Reports. 8:10391
Guzzolino, E., Chiavacci, E., Ahuja, N., Mariani, L., Evangelista, M., Ippolito, C., Rizzo, M., Garrity, D., Cremisi, F., Pitto, L. (2018) Post-transcriptional Modulation of Sphingosine-1-Phosphate Receptor 1 by miR-19a Affects Cardiovascular Development in Zebrafish. Frontiers in cell and developmental biology. 6:58
Hofsteen, P., Robitaille, A.M., Strash, N., Palpant, N., Moon, R.T., Pabon, L., Murry, C.E. (2018) ALPK2 Promotes Cardiogenesis in Zebrafish and Human Pluripotent Stem Cells. iScience. 2:88-100
Meng, J., Xu, W.Y., Chen, X., Lin, T., Deng, X.Y. (2018) Gene locations may contribute to predicting gene regulatory relationships. Journal of Zhejiang University. Science. B. 19:25-37
Banerji, R., Skibbens, R.V., Iovine, M.K. (2017) Cohesin mediates Esco2-dependent transcriptional regulation in zebrafish regenerating fin model of Roberts syndrome. Biology Open. 6(12):1802-1813
Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
Cechmanek, P.B., McFarlane, S. (2017) Retinal pigment epithelium expansion around the neural retina occurs in two separate phases with distinct mechanisms. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(8):598-609
Dardis, G., Tryon, R., Ton, Q., Johnson, S.L., Iovine, M.K. (2017) Cx43 suppresses evx1 expression to regulate joint initiation in the regenerating fin. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(9):691-699
Fukuda, R., Gunawan, F., Beisaw, A., Jimenez-Amilburu, V., Maischein, H.M., Kostin, S., Kawakami, K., Stainier, D.Y. (2017) Proteolysis regulates cardiomyocyte maturation and tissue integration. Nature communications. 8:14495
Henke, K., Daane, J.M., Hawkins, M.B., Dooley, C.M., Busch-Nentwich, E.M., Stemple, D.L., Harris, M.P. (2017) Genetic Screen for Postembryonic Development in the Zebrafish (Danio rerio): Dominant Mutations Affecting Adult Form.. Genetics. 207(2):609-623
Rabinowitz, J.S., Robitaille, A.M., Wang, Y., Ray, C.A., Thummel, R., Gu, H., Djukovic, D., Raftery, D., Berndt, J.D., Moon, R.T. (2017) Transcriptomic, proteomic, and metabolomic landscape of positional memory in the caudal fin of zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 114(5):E717-E726
Tang, H., Chen, Y., Wang, L., Yin, Y., Li, G., Guo, Y., Liu, Y., Lin, H., Cheng, C.H.K., Liu, X. (2017) Fertility impairment with defective spermatogenesis and steroidogenesis in male zebrafish lacking androgen receptor. Biology of reproduction. 98(2):227-238
Banerji, R., Eble, D.M., Iovine, M.K., Skibbens, R.V. (2016) Esco2 regulates cx43 expression during skeletal regeneration in the zebrafish fin. Developmental Dynamics : an official publication of the American Association of Anatomists. 245(1):7-21
Govindan, J., Tun, K.M., Iovine, M.K. (2016) Cx43-Dependent Skeletal Phenotypes Are Mediated by Interactions between the Hapln1a-ECM and Sema3d during Fin Regeneration. PLoS One. 11:e0148202
Hulsey, C.D., Fraser, G.J., Meyer, A. (2016) Biting into the Genome to Phenome Map: Developmental Genetic Modularity of Cichlid Fish Dentitions. Integrative and Comparative Biology. 56(3):373-88
Misu, A., Yamanaka, H., Aramaki, T., Kondo, S., Skerrett, I.M., Iovine, M.K., Watanabe, M. (2016) Two different functions of Connexin43 confer two different bone phenotypes in zebrafish. The Journal of biological chemistry. 291(24):12601-11
Watanabe, M., Sawada, R., Aramaki, T., Skerrett, I.M., Kondo, S. (2016) The physiological characterization of Connexin41.8 and Connexin39.4, which are involved in the stripe pattern formation of zebrafish. The Journal of biological chemistry. 291(3):1053-63
Bhadra, J., Iovine, M.K. (2015) Hsp47 mediates Cx43-dependent skeletal growth and patterning in the regenerating fin. Mechanisms of Development. 138 Pt 3:364-74
Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
Fadeev, A., Krauss, J., Frohnhöfer, H.G., Irion, U., Nüsslein-Volhard, C. (2015) Tight junction protein 1a regulates pigment cell organisation during zebrafish colour patterning. eLIFE. 4
Palpant, N.J., Hofsteen, P., Pabon, L., Reinecke, H., Murry, C.E. (2015) Cardiac Development in Zebrafish and Human Embryonic Stem Cells Is Inhibited by Exposure to Tobacco Cigarettes and E-Cigarettes. PLoS One. 10:e0126259
Schuster, K., Leeke, B., Meier, M., Wang, Y., Newman, T., Burgess, S., Horsfield, J.A. (2015) A neural crest origin for cohesinopathy heart defects. Human molecular genetics. 24(24):7005-16
Sharma, P., Abbasi, C., Lazic, S., Teng, A.C., Wang, D., Dubois, N., Ignatchenko, V., Wong, V., Liu, J., Araki, T., Tiburcy, M., Ackerley, C., Zimmermann, W.H., Hamilton, R., Sun, Y., Liu, P.P., Keller, G., Stagljar, I., Scott, I.C., Kislinger, T., Gramolini, A.O. (2015) Evolutionarily conserved intercalated disc protein Tmem65 regulates cardiac conduction and connexin 43 function. Nature communications. 6:8391
Wang, J., Wu, Y., Zhao, F., Wu, Y., Dong, W., Zhao, J., Zhu, Z., Liu, D. (2015) Fgf-signaling-dependent sox9a and atoh1a regulate otic neural development in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 35:234-44
Govindan, J., and Iovine, M.K. (2014) Hapln1a is required for connexin43-dependent growth and patterning in the regenerating fin skeleton. PLoS One. 9(2):e88574
Kujawski, S., Lin, W., Kitte, F., Börmel, M., Fuchs, S., Arulmozhivarman, G., Vogt, S., Theil, D., Zhang, Y., Antos, C.L. (2014) Calcineurin regulates coordinated outgrowth of zebrafish regenerating fins. Developmental Cell. 28:573-87
Perathoner, S., Daane, J.M., Henrion, U., Seebohm, G., Higdon, C.W., Johnson, S.L., Nüsslein-Volhard, C., and Harris, M.P. (2014) Bioelectric signaling regulates size in zebrafish fins. PLoS Genetics. 10(1):e1004080
Go, W., and Korzh, V. (2013) Plasma membrane Ca(2+) ATPase Atp2b1a regulates bone mineralization in zebrafish. Bone. 54(1):48-57
Morais, R.D., Nóbrega, R.H., Gómez-González, N.E., Schmidt, R., Bogerd, J., França, L.R., and Schulz, R.W. (2013) Thyroid Hormone Stimulates the Proliferation of Sertoli Cells and Single Type A Spermatogonia in Adult Zebrafish (Danio rerio) Testis. Endocrinology. 154(11):4365-76
Thi Thu, H.N., Haw Tien, S.F., Loh, S.L., Bok Yan, J.S., and Korzh, V. (2013) tbx2a Is Required for Specification of Endodermal Pouches during Development of the Pharyngeal Arches. PLoS One. 8(10):e77171
Ton, Q.V., and Iovine, M.K. (2013) Identification of an evx1-Dependent Joint-Formation Pathway during FIN Regeneration. PLoS One. 8(11):e81240
Ton, Q.V., and Iovine, M.K. (2012) Semaphorin3d mediates Cx43-dependent phenotypes during fin regeneration. Developmental Biology. 366(2):195-203
Völkers, M., Dolatabadi, N., Gude, N., Most, P., Sussman, M.A., and Hassel, D. (2012) Orai1 deficiency leads to heart failure and skeletal myopathy in zebrafish. Journal of Cell Science. 125(2):287-294
Watanabe, M., Watanabe, D., and Kondo, S. (2012) Polyamine sensitivity of gap junctions is required for skin pattern formation in zebrafish. Scientific Reports. 2:473
Wiweger, M.I., Zhao, Z., van Merkesteyn, R.J., Roehl, H.H., and Hogendoornm, P.C. (2012) HSPG-Deficient Zebrafish Uncovers Dental Aspect of Multiple Osteochondromas. PLoS One. 7(1):e29734
Yin, V.P., Lepilina, A., Smith, A., and Poss, K.D. (2012) Regulation of zebrafish heart regeneration by miR-133. Developmental Biology. 365(2):319-327
Mirbahai, L., Williams, T.D., Zhan, H., Gong, Z., and Chipman, J.K. (2011) Comprehensive profiling of zebrafish hepatic proximal promoter CpG island methylation and its modification during chemical carcinogenesis. BMC Genomics. 12:3
Chi, N.C., Bussen, M., Brand-Arzamendi, K., Ding, C., Olgin, J.E., Shaw, R.M., Martin, G.R., and Stainier, D.Y. (2010) Cardiac conduction is required to preserve cardiac chamber morphology. Proceedings of the National Academy of Sciences of the United States of America. 107(33):14662-14667
Esain, V., Postlethwait, J.H., Charnay, P., and Ghislain, J. (2010) FGF-receptor signalling controls neural cell diversity in the zebrafish hindbrain by regulating olig2 and sox9. Development (Cambridge, England). 137(1):33-42
Jiang, Q., Liu, D., Sun, S., Hu, J., Tan, L., Wang, Y., Gui, Y., Yu, M., and Song, H. (2010) Critical role of connexin43 in zebrafish late primitive and definitive hematopoiesis. Fish physiology and biochemistry. 36(4):945-951
Panáková, D., Werdich, A.A., and MacRae, C.A. (2010) Wnt11 patterns a myocardial electrical gradient through regulation of the L-type Ca(2+) channel. Nature. 466(7308):874-878
Brown, A.M., Fisher, S., and Iovine, M.K. (2009) Osteoblast maturation occurs in overlapping proximal-distal compartments during fin regeneration in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 238(11):2922-2928
Gerhart, S.V., Jefferis, R., and Iovine, M.K. (2009) Cx40.8, a Cx43-like protein, forms gap junction channels inefficiently and may require Cx43 for its association at the plasma membrane. FEBS letters. 583(21):3419-3424
Gumm, J.M., Snekser, J.L., and Iovine, M.K. (2009) Fin-mutant female zebrafish (Danio rerio) exhibit differences in association preferences for male fin length. Behavioural processes. 80(1):35-38
Hatler, J.M., Essner, J.J., and Johnson, R.G. (2009) A gap junction connexin is required in the vertebrate left-right organizer. Developmental Biology. 336(2):183-191
Sims Jr, K., Eble, D.M., and Iovine, M.K. (2009) Connexin43 regulates joint location in zebrafish fins. Developmental Biology. 327(2):410-418
Chi, N.C., Shaw, R.M., Jungblut, B., Huisken, J., Ferrer, T., Arnaout, R., Scott, I., Beis, D., Xiao, T., Baier, H., Jan, L.Y., Tristani-Firouzi, M., and Stainier, D.Y. (2008) Genetic and Physiologic Dissection of the Vertebrate Cardiac Conduction System. PLoS Biology. 6(5):e109
Hoptak-Solga, A.D., Nielsen, S., Jain, I., Thummel, R., Hyde, D.R., and Iovine, M.K. (2008) Connexin43 (GJA1) is required in the population of dividing cells during fin regeneration. Developmental Biology. 317(2):541-548
Iovine, M.K., Gumpert, A.M., Falk, M.M., and Mendelson, T.C. (2008) Cx23, a connexin with only four extracellular-loop cysteines, forms functional gap junction channels and hemichannels. FEBS letters. 582(2):165-170
Zoidl, G., Kremer, M., Zoidl, C., Bunse, S., and Dermietzel, R. (2008) Molecular diversity of connexin and pannexin genes in the retina of the zebrafish Danio rerio. Cell communication & adhesion. 15(1):169-183
Ablooglu, A.J., Kang, J., Handin, R.I., Traver, D., and Shattil, S.J. (2007) The zebrafish vitronectin receptor: Characterization of integrin alphaV and beta3 expression patterns in early vertebrate development. Developmental Dynamics : an official publication of the American Association of Anatomists. 236(8):2268-2276
Cruciani, V., and Mikalsen, S.O. (2007) Evolutionary selection pressure and family relationships among connexin genes. Biological chemistry. 388(3):253-264
Hoptak-Solga, A.D., Klein, K.A., Derosa, A.M., White, T.W., and Iovine, M.K. (2007) Zebrafish short fin mutations in connexin43 lead to aberrant gap junctional intercellular communication. FEBS letters. 581(17):3297-3302
Itzkowitz, M., and Iovine, M.K. (2007) Single gene mutations causing exaggerated fins also cause non-genetic changes in the display behavior of male zebrafish. Behaviour. 144(7):787-795
Eastman, S.D., Chen, T.H., Falk, M.M., Mendelson, T.C., and Iovine, M.K. (2006) Phylogenetic analysis of three complete gap junction gene families reveals lineage-specific duplications and highly supported gene classes. Genomics. 87(2):265-274
Park, D.J., Freitas, T.A., Wallick, C.J., Guyette, C.V., and Warn-Cramer, B.J. (2006) Molecular dynamics and in vitro analysis of Connexin43: A new 14-3-3 mode-1 interacting protein. Protein science : a publication of the Protein Society. 15(10):2344-2355
Chatterjee, B., Chin, A.J., Valdimarsson, G., Finis, C., Sonntag, J.M., Choi, B.Y., Tao, L., Balasubramanian, K., Bell, C., Krufka, A., Kozlowski, D.J., Johnson, R.G., and Lo, C.W. (2005) Developmental regulation and expression of the zebrafish connexin43 gene. Developmental Dynamics : an official publication of the American Association of Anatomists. 233(3):890-906
Iovine, M.K., Higgins, E.P., Hindes, A., Coblitz, B., and Johnson, S.L. (2005) Mutations in connexin43 (GJA1) perturb bone growth in zebrafish fins. Developmental Biology. 278(1):208-219
Woods, I.G., Wilson, C., Friedlander, B., Chang, P., Reyes, D.K., Nix, R., Kelly, P.D., Chu, F., Postlethwait, J.H., and Talbot, W.S. (2005) The zebrafish gene map defines ancestral vertebrate chromosomes. Genome research. 15(9):1307-1314
Liu, R.Z., Denovan-Wright, E.M., Degrave, A., Thisse, C., Thisse, B., and Wright, J.M. (2004) Differential expression of duplicated genes for brain-type fatty acid-binding proteins (fabp7a and fabp7b) during early development of the CNS in zebrafish (Danio rerio). Gene expression patterns : GEP. 4(4):379-387
Cheng, S., Christie, T., and Valdimarsson, G. (2003) Expression of connexin48.5, connexin44.1, and connexin43 during zebrafish (Danio rerio) lens development. Developmental Dynamics : an official publication of the American Association of Anatomists. 228(4):709-715
Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
Zhang, Y., Cui, F.Z., Wang, X.M., Feng, Q.L., and Zhu, X.D. (2002) Mechanical properties of skeletal bone in gene-mutated stöpsel^dtl28d and wild-type zebrafish (Danio rerio) measured by atomic force microscopy-based nanoindentation. Bone. 30(4):541-546
Chatterjee, B., Li, Y.X., Zdanowicz, M., Sonntag, J.M., Chin, A.J., Kozlowski, D.J., Valdimarsson, G., Kirby, M.L., and Lo, C.W. (2001) Analysis of Cx43alpha1 promoter function in the developing zebrafish embryo. Cell adhesion and communication. 8(4-6):289-292
Dermietzel, R., Kremer, M., Paputsoglu, G., Stang, A., Skerrett, I.M., Gomès, D., Srinivas, M., Janssen-Bienhold, U., Weiler, R., Nicholson, B.J., Bruzzone, R., and Spray, D.C. (2000) Molecular and functional diversity of neural connexins in the retina. The Journal of neuroscience : the official journal of the Society for Neuroscience. 20(22):8331-8343
Iovine, M.K. and Johnson, S.L. (2000) Genetic analysis of isometric growth control mechanisms in the zebrafish caudal fin. Genetics. 155(3):1321-1329
Johnson, S.L. and Bennett, P. (1999) Growth control in the ontogenetic and regenerating zebrafish fin. In The Zebrafish: Biology. H.W. Detrich, L.I. Zon, and M. Westerfield, eds. Methods Cell Biol.. 59:301-311
Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development (Cambridge, England). 123:1-36
Haffter, P., Odenthal, J., Mullins, M.C., Lin, S., Farrell, M.J., Vogelsang, E., Haas, F., Brand, M., van Eeden, F.J.M., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Kelsh, R.N., Hopkins, N., and Nüsslein-Volhard, C. (1996) Mutations affecting pigmentation and shape of the adult zebrafish. Development genes and evolution. 206(4):260-276

Additional Citations (33):

ZFIN Staff (2024) Association of Ensembl transcripts with ZFIN genes. Semi-automated Curation.

ZFIN Staff (2023) Automated Curation of UniProt Database Links. Automated Data Submission.

Zebrafish Nomenclature Committee (2020) Nomenclature Data Curation (2020). Nomenclature Committee Submission.

ZFIN Staff (2020) Addition of links from ZFIN to Expression Atlas. Semi-automated Curation.

ZFIN Staff (2017) Curation of PANTHER Gene IDs. Automated Data Submission.

ZFIN Staff (2017) Curation of Alliance of Genome Resources Database Links. Automated Data Submission.

ZFIN Staff (2015) Data Model Change: Sequence Targeting Reagents Removed from Environment. ZFIN Historical Data.

Busch-Nentwich, E., Kettleborough, R., Dooley, C. M., Scahill, C., Sealy, I., White, R., Herd, C., Mehroke, S., Wali, N., Carruthers, S., Hall, A., Collins, J., Gibbons, R., Pusztai, Z., Clark, R., and Stemple, D.L. (2013) Sanger Institute Zebrafish Mutation Project mutant data submission. ZFIN Direct Data Submission.

Geisler, R. (2013) Importation of Tübingen internal allele names. ZFIN Direct Data Submission.

ZFIN Staff (2013) Semi-automated association of ENSDARG identifiers with ZFIN genes for the ZMP project. Semi-automated Curation.

UniProt-GOA (2011) Gene Ontology annotation based on the automatic assignment of UniProtKB Subcellular Location terms in UniProtKB/TrEMBL entries. Manually curated data.

Gaudet, P., Livstone, M., Thomas, P., The Reference Genome Project (2010) Annotation inferences using phylogenetic trees. Automated Data Submission.

ZIRC and ZFIN staff (2010) Mutant and Transgenic Line Submissions 2010. ZFIN Direct Data Submission.

Moens, C.B. and ZFIN Staff (2009) Curation of TILLING Database Links. ZFIN Direct Data Submission.

ZIRC and ZFIN Staff (2008) Mutant and Transgenic Line Submissions 2008. ZFIN Direct Data Submission.

GOA, HGNC, AgBase and UniProtKB curators (2007) Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity. ZFIN Direct Data Submission.

ZFIN Staff (2007) Microarray Expression to Gene Association in ZFIN. Semi-automated Curation.

Ensembl curators, GOA curators (2006) Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara. Manually curated data.

Phenotype Annotation (1994-2006) (2006) Mutant Data Curated from Older Literature. ZFIN Historical Data.

ZFIN Staff (2006) Curation of Ensembl Database Links. Automated Data Submission.

Thisse, B., Thisse, C. (2004) Fast Release Clones: A High Throughput Expression Analysis. ZFIN Direct Data Submission.

ZFIN Staff (2004) ZGC Data Curation and Association in ZFIN by ZFIN Staff. Semi-automated Curation.

ZFIN Staff (2004) Temporary Manual Curation. Manually curated data.

Rauch, G.J., Lyons, D.A., Middendorf, I., Friedlander, B., Arana, N., Reyes, T., and Talbot, W.S. (2003) Submission and Curation of Gene Expression Data. ZFIN Direct Data Submission.

Zebrafish Nomenclature Committee (2003) Nomenclature Data Curation (2003-2010). Nomenclature Committee Submission.

ZFIN Staff (2003) Submission and Curation of Mutant and Transgenic Lines. ZFIN Direct Data Submission.

ZFIN Staff (2003) Curation of VEGA Database Links. Automated Data Submission.

ZFIN Staff (2003) Curation of FPC Database Links. Automated Data Submission.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of UniProt Keywords with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of NCBI Gene Data Via Shared RNA Sequence IDs. Automated Data Submission.

ZFIN Staff (2002) Scientific Curation. Manually curated data.

ZFIN Staff (2002) Gene Ontology Annotation Through Association of InterPro Records with GO Terms. Automated Data Submission.

ZFIN Staff (2002) Curation of EMBL records. Automated Data Submission.