ZFIN ID: ZDB-GENE-990415-271

Mapping Details

Gene Name: rhodopsin
Symbol: rho
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 8 54,076,195 - 54,077,740 GRCz11
Ensembl 8 54,076,195 - 54,077,740 GRCz11
Vega 8 53,668,767 - 53,670,321 GRCv10
NCBI Map Viewer 8 54,076,192 - 54,077,740 GRCz11
UCSC 8 - GRCv10
Mapped Clones containing rho
CH1073-274H22 Chr: 8 Details
CH1073-268B21 Chr: 8 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
djh503 8 54,076,688 - 54,076,692 GRCz11 Unal Eroglu et al., 2018
fl6 8 54,077,607 GRCz11 Zelinka et al., 2018
fl7 8 54,077,605 - 54,077,610 GRCz11 Zelinka et al., 2018
fl8 8 54,076,639 - 54,076,644 GRCz11 Zelinka et al., 2018
fl9 8 54,076,593 - 54,076,616 GRCz11 Zelinka et al., 2018
fl10 8 54,077,607 - 54,077,609 GRCz11 Zelinka et al., 2018
ouc2003 8 54,076,709 - 54,076,713 GRCz11 Feng et al., 2017
sa21401 8 54,077,460 GRCz11 Busch-Nentwich et al., 2013
8 53,670,035 GRCz10 Busch-Nentwich et al., 2013
8 55,708,150 Zv9 Busch-Nentwich et al., 2013
sa31692 8 54,076,861 GRCz11 Busch-Nentwich et al., 2013
8 53,669,436 GRCz10 Busch-Nentwich et al., 2013
8 55,707,551 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
8 5923.0 cR rho Goodfellow T51 (T51) Geisler, Robert Data
8 137.4 cM rho Heat Shock (HS) Woods, Ian G. Data
8 107.43 cM rho Gates et al (GAT) Talbot, William S. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z53435 SSLP 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and  ...
z9637 SSLP 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and  ...
brpf1 GENE 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and  ...
Df(Chr08)fs31l Feature 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and  ...
plxnd1 GENE 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and  ...

OTHER MAPPING INFORMATION
Chr 8 Torres-Vazquez et al., 2004 In Torres-Vazquez et al. 2004, obd was mapped to LG8 near brpf1, rho/z9637 and z53435. At the time  ...
Markers Encoded by rho
fi06d11 Chr: 8 Details