ZFIN ID: ZDB-GENE-000823-8

Mapping Details

Gene Name: homeobox A11a
Symbol: hoxa11a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 19 19,737,214 - 19,738,923 GRCz11
Ensembl 19 19,737,214 - 19,738,923 GRCz11
Vega 19 20,164,263 - 20,165,972 GRCv10
NCBI Map Viewer 19 19,734,288 - 19,739,485 GRCz11
UCSC 19 - GRCv10
Mapped Clones containing hoxa11a
DKEY-25E11 Chr: 19 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
mh139 19 19,737,552 - 19,737,553 GRCz11 Hawkins et al., 2021
mh140 19 19,737,547 - 19,737,553 GRCz11 Hawkins et al., 2021
mh141 19 19,737,547 - 19,737,556 GRCz11 Hawkins et al., 2021
la013394Tg 19 19,204,200 - 19,204,210 Zv9

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
hoxa5a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa1a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
evx1 GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa13a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa10ap GENEP 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa9a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa3a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
hoxa4a GENE 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1, hoxa13a, hoxa11a, hoxa10ap, hoxa9a, hoxa5a, hoxa4a, hoxa3a, and hoxa1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG19.
mir196a-2 MIRNAG 19 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-2 gene between the  ...
hoxa9a GENE 19 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-2 gene between the  ...
mc5ra GENE 19 12.3 cM Ringholm et al., 2002 Ringholm et al. (2002, J Neurochem 82(1):6-18) report mapping mc5ra to LG 19, 12.3 cM from hoxa11a, indistinguishably close to gdf6b, using the Heat Shock mapping panel.
gdf6b GENE 19 Ringholm et al., 2002 Ringholm et al. (2002, J Neurochem 82(1):6-18) report mapping mc5ra to LG 19, 12.3 cM from hoxa11a, indistinguishably close to gdf6b, using the Heat Shock mapping panel.

OTHER MAPPING INFORMATION
Chr 19 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report evx1,  ...
Chr 19 He et al., 2011 He X et al (Zebrafish 8(1), 1-8) placed the mirn196a-2 gene between the hoxa11a and hox9a genes on  ...