ZFIN ID: ZDB-GENE-000823-4
Gene Name: homeobox A4a
Gene Symbol: hoxa4a    Nomenclature History

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Previous Names: hoxx4, hoxzf26, im:6899783, ns:zf-es36 (1), ZF-26, zf-es36, zf26

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and activating transcription factor binding activity. Predicted to be involved in anterior/posterior pattern specification and embryonic skeletal system morphogenesis. Predicted to localize to nucleus. Is expressed in several structures, including digestive system; hindbrain neural keel; hindbrain neural rod; nervous system; and notochord. Orthologous to human HOXA4 (homeobox A4).
Genome Resources: Alliance (1),  Gene:58050 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hoxa4a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hoxa4a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
Browsers: NCBI
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
CONSTRUCTS WITH SEQUENCES FROM hoxa4a
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(-1.7hoxa4a:GFP) hoxa4a GFP Danio rerio 1 2
Tg(-3.7hoxa4a:GFP) hoxa4a GFP Danio rerio 1 2
Tg(-4.3hoxa4a:GFP) hoxa4a GFP Danio rerio 1 2
Tg(-5.7hoxa4a:GFP) hoxa4a GFP Danio rerio 1 2
Tg(hoxa4a:GFP) hoxa4a GFP Danio rerio 1 2
MARKER RELATIONSHIPS
hoxa4a Contained in: [BAC] DKEY-25E11 (1) (order this)
hoxa4a Encodes: [EST] IMAGE:6899783 (1), zf-es36
[cDNA] MGC:154113 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131535 (1) 1366 nt
Genomic GenBank:CR382300 (1) 202006 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q9PWL5 (1) 245 aa
Sequence Information (all 30)
ORTHOLOGY for hoxa4a ( Chr: 19 )
CITATIONS (46)