ZFIN ID: ZDB-GENE-021223-3
Gene Name: melanocortin 5a receptor
Gene Symbol: mc5ra
Sequence Ontology ID : SO:0000704

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Previous Name: zMC5a

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23482 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mc5ra HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process G-protein coupled receptor signaling pathway (more)
    Cellular Component integral component of membrane (more)
    Molecular Function G-protein coupled receptor activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000276 (1)
  • InterPro:IPR000621 (1)
  • InterPro:IPR001671 (1)
  • InterPro:IPR001908 (1)
  • InterPro:IPR017452 (1)
  • PROSITE:PS00237 (1)
  • PROSITE:PS50262 (1)
  • Pfam:PF00001 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mc5ra-001 (1) 1626
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mc5ra No data available
    MARKER RELATIONSHIPS
    mc5raContained in: [BAC] CH211-105D11 (1) (order this), DKEY-155O15 (1) (order this)
    mc5raEncodes: [cDNA] MGC:194637 (1) (order this), MGC:194657 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173279 (1) 951bp
    Genomic GenBank:AL844521 (1) 213269bp Blast at MegaBLAST
    Polypeptide UniProtKB:A3KGQ1 (1) 328aa
    Sequence Clusters UniGene:88558 (1)
    Sequence Information (all 22)
    OTHER mc5ra GENE PAGES
  • Alliance (1)
  • Gene:286834 (1)
  • VEGA:OTTDARG00000015880 (1)
  • Ensembl(GRCz10):ENSDARG00000031348 (1)
  • ORTHOLOGY for mc5ra (Chr: 19)
    CITATIONS (30)