ZFIN ID: ZDB-GENE-000823-9
Gene Name: homeobox A5a
Gene Symbol: hoxa5a
Sequence Ontology ID : SO:0000704

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Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 4 publications
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2005 [eu291]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hoxa5a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hoxa5a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR017995 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxa5a-001 (1) 888
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxa5a No data available
    MARKER RELATIONSHIPS
    hoxa5aContained in: [BAC] DKEY-25E11 (1) (order this)
    hoxa5aEncodes: [EST] eu291 (1)
    [cDNA] MGC:194411 (1) (order this), MGC:194428 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131540 (1) 684bp
    Genomic GenBank:CR382300 (1) 202006bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q9YGT6 (1) 265aa
    Sequence Clusters UniGene:134275 (1)
    Sequence Information (all 21)
    OTHER hoxa5a GENE PAGES
  • Alliance (1)
  • Gene:58055 (1)
  • VEGA:OTTDARG00000015147 (1)
  • Ensembl(GRCz11):ENSDARG00000102501 (1)
  • ORTHOLOGY for hoxa5a (Chr: 19)
    CITATIONS (36)