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General Information
ZIRC
ZFIN ID: ZDB-GENE-000823-5
Gene Name: homeobox A1a
Gene Symbol: hoxa1a
Sequence Ontology ID : SO:0001217

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Previous Names: Hox-a1 (1), id:ibd3526 (1), z-4

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity. Predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated. Predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hoxa1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Athabaskan brainstem dysgenesis syndrome Athabaskan brainstem dysgenesis syndrome 601536
Bosley-Salih-Alorainy syndrome 601536
DISEASE ASSOCIATED WITH hoxa1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA hoxa1a-201 (1) 885
hoxa1a-202 (1) 1441
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS
Addgene
CONSTRUCTS WITH SEQUENCES FROM hoxa1a No data available
MARKER RELATIONSHIPS
hoxa1a Contained in: [BAC] DKEY-25E11 (1) (order this)
[PAC] BUSM1-227P06 (1) (order this)
hoxa1a Encodes: [EST] eu257 (1), ibd3526 (1) (order this)
[cDNA] MGC:194117 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131536 (1) 990 bp
Genomic GenBank:CR382300 (1) 202006 bp Blast at MegaBLAST
Polypeptide UniProtKB:B3DHB1 (1) 329 aa
Sequence Clusters UniGene:83046 (1)
Sequence Information (all 29)
ORTHOLOGY for hoxa1a ( Chr: 19 )
CITATIONS (47)