Gene

hoxa1a

ID
ZDB-GENE-000823-5
Name
homeobox A1a
Symbol
hoxa1a Nomenclature History
Previous Names
  • Hox-a1 (1)
  • id:ibd3526 (1)
  • z-4
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have sequence-specific DNA binding activity. Predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in Athabaskan brainstem dysgenesis syndrome and autistic disorder. Is expressed in basal plate midbrain region; central nervous system; pharyngeal arch; and presumptive hindbrain. Orthologous to human HOXA1 (homeobox A1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxa1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Athabaskan brainstem dysgenesis syndrome Alliance Athabaskan brainstem dysgenesis syndrome 601536
Athabaskan brainstem dysgenesis syndrome Alliance Bosley-Salih-Alorainy syndrome 601536
Associated With hoxa1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeobox domain
Domain IPR020479 Homeobox domain, metazoa
Family IPR046327 Homeobox protein Hox-A1/B1/D1
Homologous_superfamily IPR009057 Homeobox-like domain superfamily
Domain Details Per Protein
Protein Length Homeobox, conserved site Homeobox domain Homeobox domain, metazoa Homeobox-like domain superfamily Homeobox protein Hox-A1/B1/D1
UniProtKB:Q98SI1 329
UniProtKB:B3DHB1 329
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations