| ZFIN ID: ZDB-BAC-050218-2395 |
| SEQUENCE INFORMATION |
| BAC Name: | DKEY-7F3 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001014819 (1) | 2457 nt |
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| RefSeq:NM_001002454 (1) | 2134 nt |
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| RefSeq:NM_201329 (1) | 1726 nt |
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| RefSeq:NM_131098 (1) | 1345 nt |
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| RefSeq:NM_001079861 (1) | 1210 nt |
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| RefSeq:NM_001128758 (1) | 947 nt |
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| RefSeq:NM_001326448 (1) | 813 nt |
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| RefSeq:NM_001291886 (1) | 799 nt |
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| RefSeq:NM_001291887 (1) | 796 nt |
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| RefSeq:NM_001130586 (1) | 664 nt |
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| RefSeq:NM_200765 (1) | 536 nt |
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| RefSeq:NM_001135978 (1) | 494 nt |
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| RefSeq:NM_001386351 (1) |
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| RefSeq:NM_001386381 (1) |
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| RefSeq:NR_136943 (1) | 752 nt |
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| RefSeq:XM_005158086 (1) | 1618 nt |
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| RefSeq:XM_021466732 (1) | 1195 nt |
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| RefSeq:XM_021466733 (1) | 1090 nt |
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| RefSeq:XM_001338001 (1) |
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| RefSeq:XM_005158145 (1) |
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| RefSeq:XM_009292296 (1) |
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| RefSeq:XM_009292297 (1) |
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| RefSeq:XM_017351495 (1) |
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| RefSeq:XM_017351496 (1) |
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| RefSeq:XR_002455713 (1) | 1109 nt |
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| GenBank:GDQH01021034 (1) | 4466 nt |
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| GenBank:GFIL01012190 (1) | 4162 nt |
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| GenBank:GDQQ01001735 (1) | 4151 nt |
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| GenBank:BC139866 (1) | 2672 nt |
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| GenBank:BC162723 (1) | 2567 nt |
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| GenBank:AY858826 (1) | 2457 nt |
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| GenBank:GDQH01000432 (1) | 2235 nt |
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| GenBank:BC076017 (1) | 2134 nt |
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| GenBank:GFIL01032009 (1) | 1865 nt |
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| GenBank:BC053195 (1) | 1726 nt |
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| GenBank:BC049470 (1) | 1417 nt |
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| GenBank:BC154034 (1) | 1389 nt |
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| GenBank:BC065592 (1) | 1377 nt |
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| GenBank:Y13652 (1) | 1345 nt |
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| GenBank:BC107620 (1) | 1210 nt |
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| GenBank:BC093239 (1) | 1197 nt |
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| GenBank:BC076032 (1) | 1184 nt |
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| GenBank:GFIL01046763 (1) | 1078 nt |
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| GenBank:GDQH01000445 (1) | 1005 nt |
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| GenBank:GFIL01001289 (1) | 1001 nt |
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| GenBank:EH434171 (1) | 994 nt |
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| GenBank:GFIL01001304 (1) | 974 nt |
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| GenBank:BC162715 (1) | 947 nt |
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| GenBank:BC162716 (1) | 947 nt |
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| GenBank:GFIL01001294 (1) | 943 nt |
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| GenBank:EH498969 (1) | 833 nt |
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| GenBank:EH489275 (1) | 809 nt |
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| GenBank:EH483599 (1) | 799 nt |
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| GenBank:EH501830 (1) | 752 nt |
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| GenBank:BC162121 (1) | 664 nt |
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| GenBank:BC162124 (1) | 664 nt |
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| GenBank:AM422094 (1) | 661 nt |
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| GenBank:CN321250 (1) | 613 nt |
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| GenBank:BC162528 (1) | 608 nt |
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| GenBank:GFIL01033913 (1) | 561 nt |
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| GenBank:AL910993 (1) | 539 nt |
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| GenBank:AL912228 (1) | 539 nt |
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| GenBank:BC059595 (1) | 536 nt |
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| GenBank:AL916586 (1) | 528 nt |
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| GenBank:AI545181 (1) | 502 nt |
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| GenBank:BC162151 (1) | 494 nt |
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| GenBank:BC162164 (1) | 494 nt |
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| GenBank:BC128898 (1) | 325 nt |
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| GenBank:BC122310 (1) | 324 nt |
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| GenBank:BC142850 (1) | 320 nt |
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| GenBank:AI545629 (1) | 268 nt |
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| GenBank:GDQH01001479 (1) |
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| GenBank:GFIL01021970 (1) |
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| GenBank:GFIL01037707 (1) |
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| Genomic | GenBank:BX004983 | 234489 nt | Blast at MegaBLAST |
| GenBank:AJ236882 | 3850 nt |
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| GenBank:DU645104 (1) | 232 nt |
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| Polypeptide | UniProtKB:Q5I2W8 (1) | 818 aa |
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| UniProtKB:A0A0R4IZW2 (1) | 725 aa |
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| UniProtKB:A0A8M3AQK4 (1) | 708 aa |
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| UniProtKB:A0A8M6YSV8 (1) | 637 aa |
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| UniProtKB:A0A8M3AI29 (1) | 604 aa |
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| UniProtKB:Q6DHF7 (1) | 380 aa |
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| UniProtKB:A0A8M9NZC6 (1) | 314 aa |
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| UniProtKB:O42364 (1) | 281 aa |
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| UniProtKB:B3DHC5 (1) | 255 aa |
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| UniProtKB:F1QJD1 (1) | 255 aa |
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| UniProtKB:Q3B7G4 (1) | 255 aa |
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| UniProtKB:Q7T3A4 (1) | 200 aa |
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| UniProtKB:B3DFP9 (1) | 141 aa |
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| UniProtKB:E9QJG3 (1) | 136 aa |
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| UniProtKB:B3DFS8 (1) | 102 aa |
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| UniProtKB:E9QEQ1 (1) | 100 aa |
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| UniProtKB:E9QDI1 (1) | 85 aa |
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| UniProtKB:E9QFX0 (1) | 84 aa |
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| UniProtKB:Q6PBT1 (1) | 84 aa |
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| RefSeq:NP_001014819 (1) | 818 aa |
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| RefSeq:NP_001002454 (1) | 380 aa |
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| RefSeq:NP_001073330 (1) | 255 aa |
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| RefSeq:NP_001122230 (1) | 255 aa |
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| RefSeq:NP_958486 (1) | 200 aa |
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| RefSeq:NP_001124058 (1) | 141 aa |
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| RefSeq:NP_957059 (1) | 84 aa |
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| RefSeq:NP_001129450 (1) |
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| RefSeq:NP_001278815 (1) |
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| RefSeq:NP_001278816 (1) |
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| RefSeq:NP_001313377 (1) |
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| RefSeq:NP_001373280 (1) |
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| RefSeq:NP_001373310 (1) |
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| RefSeq:NP_571173 (1) |
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| RefSeq:XP_001338037 (1) | 255 aa |
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| RefSeq:XP_005158143 (1) |
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| RefSeq:XP_005158202 (1) |
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| RefSeq:XP_009290571 (1) |
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| RefSeq:XP_009290572 (1) |
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| RefSeq:XP_017206984 (1) |
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| RefSeq:XP_017206985 (1) |
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| RefSeq:XP_021322407 (1) |
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| RefSeq:XP_021322408 (1) |
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| GenPept:AAI62723 (1) | 818 aa |
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| GenPept:AAW50708 (1) | 818 aa |
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| GenPept:Q5I2W8 (1) | 818 aa |
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| GenPept:AAH76017 (1) | 380 aa |
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| GenPept:Q6DHF7 (1) | 380 aa |
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| GenPept:AAH65592 (1) | 281 aa |
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| GenPept:AAI54035 (1) | 281 aa |
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| GenPept:CAA74003 (1) | 281 aa |
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| GenPept:CAB64946 (1) | 281 aa |
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| GenPept:O42364 (1) | 281 aa |
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| GenPept:AAH93239 (1) | 268 aa |
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| GenPept:AAH76032 (1) | 260 aa |
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| GenPept:AAI07621 (1) | 255 aa |
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| GenPept:AAI62715 (1) | 255 aa |
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| GenPept:AAI62716 (1) | 255 aa |
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| GenPept:AAH53195 (1) | 200 aa |
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| GenPept:Q7T3A4 (1) | 200 aa |
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| GenPept:CAM12239 (1) | 158 aa |
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| GenPept:AAI62121 (1) | 141 aa |
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| GenPept:AAI62124 (1) | 141 aa |
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| GenPept:AAI62151 (1) | 102 aa |
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| GenPept:AAI62164 (1) | 102 aa |
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| GenPept:AAH59595 (1) | 84 aa |
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DKEY-7F3 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] apoa2 (31) | RNA | RefSeq:NM_001130586 | 664 |
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| RNA | GenBank:GFIL01001289 | 1001 |
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| RNA | GenBank:BC162124 | 664 |
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| RNA | GenBank:BC162121 | 664 |
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| RNA | GenBank:AL912228 | 539 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:B3DFP9 | 141 |
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| Polypeptide | RefSeq:NP_001124058 | 141 |
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| Polypeptide | GenPept:AAI62124 | 141 |
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| Polypeptide | GenPept:AAI62121 | 141 |
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| [GENE] apoa4b.1 (43) | RNA | RefSeq:NM_001079861 | 1210 |
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| RNA | GenBank:BC107620 | 1210 |
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| RNA | GenBank:BC093239 | 1197 |
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| RNA | GenBank:BC076032 | 1184 |
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| RNA | GenBank:GFIL01001294 | 943 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q3B7G4 | 255 |
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| Polypeptide | RefSeq:NP_001073330 | 255 |
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| Polypeptide | GenPept:AAH93239 | 268 |
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| Polypeptide | GenPept:AAH76032 | 260 |
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| Polypeptide | GenPept:AAI07621 | 255 |
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| [GENE] apoa4b.2 (24) | RNA | RefSeq:XM_021466732 | 1195 |
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| RNA | RefSeq:XM_021466733 | 1090 |
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| RNA | RefSeq:NM_001128758 | 947 |
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| RNA | GenBank:GDQH01000445 | 1005 |
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| RNA | GenBank:BC162716 | 947 |
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| RNA | GenBank:BC162715 | 947 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:A0A8M9NZC6 | 314 |
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| Polypeptide | UniProtKB:F1QJD1 | 255 |
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| Polypeptide | UniProtKB:B3DHC5 | 255 |
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| Polypeptide | RefSeq:XP_021322408 |
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| Polypeptide | RefSeq:XP_021322407 |
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| Polypeptide | RefSeq:NP_001122230 | 255 |
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| Polypeptide | GenPept:AAI62716 | 255 |
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| Polypeptide | GenPept:AAI62715 | 255 |
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| [GENE] apoa4b.3 (17) | RNA | RefSeq:XM_001338001 |
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| RNA | RefSeq:NM_001386381 |
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| RNA | GenBank:GFIL01037707 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:F1QJD1 | 255 |
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| Polypeptide | RefSeq:XP_001338037 | 255 |
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| Polypeptide | RefSeq:NP_001373310 |
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| [GENE] apoc1 (23) | RNA | RefSeq:NM_001291886 | 799 |
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| RNA | RefSeq:NM_001291887 | 796 |
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| RNA | GenBank:GFIL01001304 | 974 |
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| RNA | GenBank:EH489275 | 809 |
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| RNA | GenBank:CN321250 | 613 |
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| RNA | GenBank:BC162528 | 608 |
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| RNA | GenBank:AL910993 | 539 |
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| RNA | GenBank:BC128898 | 325 |
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| RNA | GenBank:BC122310 | 324 |
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| RNA | GenBank:BC142850 | 320 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:E9QDI1 | 85 |
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| Polypeptide | UniProtKB:E9QFX0 | 84 |
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| Polypeptide | RefSeq:NP_001278816 |
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| Polypeptide | RefSeq:NP_001278815 |
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| [GENE] apoc2 (25) | RNA | RefSeq:NM_001326448 | 813 |
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| RNA | RefSeq:NR_136943 | 752 |
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| RNA | GenBank:GDQQ01001735 | 4151 |
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| RNA | GenBank:EH498969 | 833 |
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| RNA | GenBank:EH483599 | 799 |
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| RNA | GenBank:EH501830 | 752 |
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|
| RNA | GenBank:AL916586 | 528 |
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| RNA | GenBank:AI545181 | 502 |
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|
| RNA | GenBank:AI545629 | 268 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:E9QEQ1 | 100 |
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|
| Polypeptide | RefSeq:NP_001313377 |
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| [GENE] apoc4 (11) | RNA | RefSeq:NM_001135978 | 494 |
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| RNA | GenBank:GFIL01046763 | 1078 |
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| RNA | GenBank:BC162164 | 494 |
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|
| RNA | GenBank:BC162151 | 494 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:B3DFS8 | 102 |
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|
| Polypeptide | RefSeq:NP_001129450 |
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| Polypeptide | GenPept:AAI62164 | 102 |
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|
| Polypeptide | GenPept:AAI62151 | 102 |
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| [GENE] apoeb (132) | RNA | RefSeq:XM_005158086 | 1618 |
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| RNA | RefSeq:NM_131098 | 1345 |
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| RNA | GenBank:GDQH01000432 | 2235 |
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| RNA | GenBank:BC049470 | 1417 |
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| RNA | GenBank:BC154034 | 1389 |
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| RNA | GenBank:BC065592 | 1377 |
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| RNA | GenBank:Y13652 | 1345 |
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|
| RNA | GenBank:AM422094 | 661 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Genomic | GenBank:AJ236882 | 3850 |
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|
| Polypeptide | UniProtKB:O42364 | 281 |
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|
| Polypeptide | RefSeq:XP_005158143 |
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| Polypeptide | RefSeq:NP_571173 |
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| Polypeptide | GenPept:O42364 | 281 |
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|
| Polypeptide | GenPept:CAB64946 | 281 |
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| Polypeptide | GenPept:CAA74003 | 281 |
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| Polypeptide | GenPept:AAI54035 | 281 |
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| Polypeptide | GenPept:AAH65592 | 281 |
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|
| Polypeptide | GenPept:CAM12239 | 158 |
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| [GENE] fam189b (3) | RNA | RefSeq:XM_009292297 |
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| RNA | RefSeq:XM_009292296 |
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| RNA | RefSeq:XM_005158145 |
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| RNA | GenBank:GFIL01021970 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:A0A0R4IZW2 | 725 |
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| Polypeptide | UniProtKB:A0A8M3AQK4 | 708 |
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| Polypeptide | UniProtKB:A0A8M3AI29 | 604 |
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| Polypeptide | RefSeq:XP_009290572 |
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| Polypeptide | RefSeq:XP_009290571 |
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| Polypeptide | RefSeq:XP_005158202 |
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| [GENE] gtpbp10 (10) | RNA | RefSeq:NM_001002454 | 2134 |
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| RNA | RefSeq:XR_002455713 | 1109 |
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| RNA | GenBank:GFIL01012190 | 4162 |
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|
| RNA | GenBank:BC076017 | 2134 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q6DHF7 | 380 |
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| Polypeptide | RefSeq:NP_001002454 | 380 |
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| Polypeptide | GenPept:Q6DHF7 | 380 |
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| Polypeptide | GenPept:AAH76017 | 380 |
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| [GENE] nbn (19) | RNA | RefSeq:NM_001014819 | 2457 |
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| RNA | GenBank:GDQH01021034 | 4466 |
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| RNA | GenBank:BC139866 | 2672 |
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| RNA | GenBank:BC162723 | 2567 |
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|
| RNA | GenBank:AY858826 | 2457 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q5I2W8 | 818 |
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| Polypeptide | RefSeq:NP_001014819 | 818 |
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| Polypeptide | GenPept:Q5I2W8 | 818 |
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|
| Polypeptide | GenPept:AAW50708 | 818 |
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|
| Polypeptide | GenPept:AAI62723 | 818 |
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| [GENE] osgin2 (5) | RNA | RefSeq:XM_017351495 |
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| RNA | GenBank:EH434171 | 994 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Genomic | GenBank:DU645104 | 232 |
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|
| Polypeptide | UniProtKB:A0A8M6YSV8 | 637 |
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|
| Polypeptide | RefSeq:XP_017206984 |
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| [GENE] rab13 (16) | RNA | RefSeq:NM_201329 | 1726 |
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| RNA | GenBank:GFIL01032009 | 1865 |
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|
| RNA | GenBank:BC053195 | 1726 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q7T3A4 | 200 |
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| Polypeptide | RefSeq:NP_958486 | 200 |
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| Polypeptide | GenPept:Q7T3A4 | 200 |
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| Polypeptide | GenPept:AAH53195 | 200 |
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| [GENE] rps27.2 (12) | RNA | RefSeq:NM_200765 | 536 |
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| RNA | GenBank:GFIL01033913 | 561 |
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| RNA | GenBank:BC059595 | 536 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q6PBT1 | 84 |
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| Polypeptide | RefSeq:NP_957059 | 84 |
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| Polypeptide | GenPept:AAH59595 | 84 |
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| [GENE] si:dkey-7f3.14 (3) | RNA | RefSeq:XM_017351496 |
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| RNA | RefSeq:NM_001386351 |
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| RNA | GenBank:GDQH01001479 |
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| Genomic | GenBank:BX004983 | 234489 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:E9QJG3 | 136 |
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| Polypeptide | RefSeq:XP_017206985 |
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| Polypeptide | RefSeq:NP_001373280 |
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