ZFIN ID: ZDB-GENE-030131-1074
Gene Name: apolipoprotein C-I
Gene Symbol: apoc1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: apoc1l, fb58g10, wu:fb58g10

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in cell migration involved in gastrulation; predicted to localize to the extracellular region; orthologous to human APOC1 (apolipoprotein C1).
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 3 figures from Wang et al., 2013
Observed in:
DISEASE ASSOCIATED WITH apoc1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH apoc1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell migration involved in gastrulation (more)
Cellular Component extracellular region (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006781 (1)
  • Pfam:PF04691 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA apoc1-001 (1) 783
    apoc1-002 (1) 777
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM apoc1 No data available
    MARKER RELATIONSHIPS
    apoc1Contained in: [BAC] DKEY-7F3 (1) (order this)
    apoc1Contains: [SNP] rs3728783 (1), rs3728784 (1)
    apoc1Encodes: [EST] fb58g10, IMAGE:7015412
    apoc1Has Artifact: [cDNA] MGC:173647 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001291886 (1)
    Genomic GenBank:BX004983 (1) 234489bp Blast at MegaBLAST
    Polypeptide UniProtKB:E9QDI1 (1) 85aa
    Sequence Clusters UniGene:77046 (1)
    Sequence Information (all 19)
    OTHER apoc1 GENE PAGES
  • Alliance (1)
  • Gene:570638 (1)
  • VEGA:OTTDARG00000033263 (1)
  • Ensembl(GRCz11):ENSDARG00000092170 (2)
  • ORTHOLOGY for apoc1 (Chr: 16)
    CITATIONS (24)