ZFIN ID: ZDB-GENE-030131-1046
Gene Name: apolipoprotein A-II
Gene Symbol: apoa2    Nomenclature History

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Previous Names: cb1032 (1), wu:fb57h11 (1), zgc:193613

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Involved in chordate embryonic development; epiboly involved in gastrulation with mouth forming second; and nuclear division. Is expressed in liver and yolk syncytial layer.
Genome Resources: Alliance (1),  Gene:322327 (1),  Ensembl(GRCz11):ENSDARG00000015866 (2)
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 5 figures (5 images) from Thisse et al., 2001 [cb1032]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22838 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42718 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-apoa2 N/A 1
    MO2-apoa2 N/A 1
    MO3-apoa2 N/A 1
    MO4-apoa2 N/A 1
    DISEASE ASSOCIATED WITH apoa2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH apoa2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA apoa2-201 (1)    Ensembl 664
    apoa2-203 (1)    Ensembl 728
    ncRNA apoa2-003 (1)    Ensembl 699
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM apoa2
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(-1.7-apoa2:apo-RFP) apoa2 apoRFP Danio rerio 1 1
    Tg(-1.7apoa2:apo-GFP) apoa2 apoGFP Danio rerio 1 1
    Tg(-1.7apoa2:GFP) apoa2 GFP Danio rerio 2 4
    Tg(-1.7apoa2:RFP) apoa2 RFP Danio rerio 1 1
    Tg2(-1.7apoa2:GFP) apoa2 GFP Danio rerio 0 1
    MARKER RELATIONSHIPS
    apoa2 Contained in: [BAC] DKEY-7F3 (order this)
    apoa2 Encodes: [EST] cb1032 (1) (order this), fb57h11
    [cDNA] MGC:193607 (1), MGC:193613 (1)
    apoa2 Has Artifact: [EST] fb64f06
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001130586 (1) 664 nt
    Genomic GenBank:BX004983 (1) 234489 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B3DFP9 (1) 141 aa
    Sequence Information (all 16)
    ORTHOLOGY for apoa2 ( Chr: 16 )
    CITATIONS (36)