ZFIN ID: ZDB-GENE-030131-1263
Gene Name: apolipoprotein A-IV b, tandem duplicate 1
Gene Symbol: apoa4b.1    Nomenclature History

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Previous Names: Apo A-IV (1), apoa4, wu:fb64f03, wu:fb66f09, zgc:122983

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to localize to extracellular region. Is expressed in female organism; gut; liver; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Alzheimer's disease; colitis; myocardial infarction; and ulcerative colitis. Orthologous to human APOA4 (apolipoprotein A4).
Genome Resources: Alliance (1),  Gene:322543 (1),  Ensembl(GRCz11):ENSDARG00000040298 (2)
GENE EXPRESSION
All Expression Data: 23 figures from 8 publications
Directly Submitted Expression Data: 7 figures (6 images) from Thisse et al., 2004 [IMAGE:6908289]
  7 figures (6 images) from Thisse et al., 2004 [IMAGE:6910484]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH apoa4b.1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH apoa4b.1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process lipid transport (more)
Cellular Component extracellular region (more)
Molecular Function lipid binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA apoa4b.1-201 (1)    Ensembl 1202
ncRNA apoa4b.1-002 (1)    Ensembl 417
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
CONSTRUCTS WITH SEQUENCES FROM apoa4b.1
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(hsp70l:apoa4b.1-mCherry) hsp70l apoa4b.1mCherry Danio rerio 1 2
MARKER RELATIONSHIPS
apoa4b.1 Contained in: [BAC] DKEY-7F3 (1) (order this)
apoa4b.1 Encodes: [EST] fb64f03, fb66f09, IMAGE:6908289 (1), IMAGE:6910484 (1), IMAGE:7046195
[cDNA] MGC:109742 (1), MGC:122983 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001079861 (1) 1210 nt
Genomic GenBank:BX004983 (1) 234489 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q567B9 (1) 268 aa
Sequence Information (all 23)
ORTHOLOGY for apoa4b.1 ( Chr: 16 )
CITATIONS (50)