ZFIN ID: ZDB-GENE-980526-368
Gene Name: apolipoprotein Eb
Gene Symbol: apoeb
Sequence Ontology ID : SO:0000704

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Previous Names: ApoE-2 (1), apoe, cb82 (1), hm:zeh1311, wu:fa03d06 (1), wu:fa97a11 (1), wu:fc95h12 (1), wu:fj54e06 (1), zeh1311

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 65 figures from 34 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2001 [cb82]
  7 figures (19 images) from Thisse et al., 2005 [eu173]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36120 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • scu3 Indel Unknown Unknown TALEN
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH apoeb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    age related macular degeneration 1 {?Macular degeneration, age-related} 603075
    Alzheimer's disease 2 Alzheimer disease-2 104310
    sea-blue histiocytosis Sea-blue histiocyte disease 269600
    {Coronary artery disease, severe, susceptibility to} 617347
    {Coronary artery disease, severe, susceptibility to} 617347
    Hyperlipoproteinemia, type III 617347
    Lipoprotein glomerulopathy 611771
    DISEASE ASSOCIATED WITH apoeb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process lipid transport (more)
    Cellular Component extracellular region (more)
    Molecular Function lipid binding (more)
    GO Terms (all 33)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000074 (1)
  • Pfam:PF01442 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA apoeb-001 (1) 1521
    apoeb-002 (1) 846
    ncRNA apoeb-003 (1) 882
    apoeb-004 (1) 897
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM apoeb
    MARKER RELATIONSHIPS
    apoebContained in: [BAC] DKEY-7F3 (1) (order this)
    apoebEncodes: [EST] cb82 (1) (order this), eu173 (1), fa03d06 (1), fa97a11 (1), fc95h12 (1), fj54e06 (1), zeh1311
    [cDNA] MGC:56515 (1) (order this), MGC:77232 (1) (order this), MGC:171895 (1) (order this)
    apoebHas Artifact: [EST] fa96d02
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131098 (1) 1345bp
    Genomic GenBank:BX004983 (1) 234489bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8KBA6 (1) 281aa
    Sequence Clusters UniGene:23502 (1)
    Sequence Information (all 36)
    OTHER apoeb GENE PAGES
  • Alliance (1)
  • Gene:30314 (1)
  • VEGA:OTTDARG00000021059 (1)
  • Ensembl(GRCz11):ENSDARG00000040295 (2)
  • ORTHOLOGY for apoeb (Chr: 16)
    CITATIONS (103)