ZFIN ID: ZDB-GENE-980526-368
Gene Name: apolipoprotein Eb
Gene Symbol: apoeb
Sequence Ontology ID : SO:0000704

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Previous Names: ApoE-2 (1), apoe, cb82 (1), hm:zeh1311, wu:fa03d06 (1), wu:fa97a11 (1), wu:fc95h12 (1), wu:fj54e06 (1), zeh1311

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 64 figures from 33 publications
Directly Submitted Expression Data: 7 figures (19 images) from Thisse et al., 2005 [eu173]
  7 figures (8 images) from Thisse et al., 2001 [cb82]
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Adult (90d-730d, breeding adult)
  anal fin, apical ectodermal ridge, apical ectodermal ridge dorsal fin, apical ectodermal ridge pectoral fin bud (all 63) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36120 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • scu3 Indel Unknown Unknown TALEN
    Targeting reagents: TALEN1-apoeb (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH apoeb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    age related macular degeneration 1 {?Macular degeneration, age-related} 603075
    Alzheimer's disease 2 Alzheimer disease-2 104310
    sea-blue histiocyte syndrome Sea-blue histiocyte disease 269600
    Hyperlipoproteinemia, type III
    Lipoprotein glomerulopathy 611771
    {Myocardial infarction susceptibility}
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process lipid transport (more)
    Cellular Component extracellular region (more)
    Molecular Function lipid binding (more)
    GO Terms (all 34)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000074
  • Pfam:PF01442
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA apoeb-001 (1) 1521
    apoeb-002 (1) 846
    ncRNA apoeb-003 (1) 882
    apoeb-004 (1) 897
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM apoeb
    Tg(apoeb:LY-EGFP)
    MARKER RELATIONSHIPS
    apoebContained in: [BAC] DKEY-7F3 (1) (order this)
    apoebEncodes: [EST] cb82 (1) (order this), eu173 (1), fa03d06 (1), fa97a11 (1), fc95h12 (1), fj54e06 (1), zeh1311
    [cDNA] MGC:56515 (1) (order this), MGC:77232 (1) (order this), MGC:171895 (1) (order this)
    apoebHas Artifact: [EST] fa96d02
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131098 (1) 1345bp
    Genomic GenBank:BX004983 (1) 234489bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8KBA6 281aa
    Sequence Clusters UniGene:23502 (1)
    Sequence Information (all 36)
    OTHER apoeb GENE PAGES
  • Alliance (1)
  • Gene:30314 (1)
  • VEGA:OTTDARG00000021059 (1)
  • Ensembl(GRCz10):ENSDARG00000040295 (1)
  • ORTHOLOGY for apoeb (Chr: 16)
    CITATIONS (86)