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ZIRC
ZFIN ID: ZDB-TSCRIPT-090929-15378
Transcript Name: lmo7a-201
Previous Name: lmo7a-001

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Attribution

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Transcript Type: mRNA
Annotation Status:
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000034642 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000034642|OTTDARG00000026179|ZDB-GENE-030219-74 lmo7a|OTTDARP00000027909 DKEY-57A22.10-001 LG_ CR536604.6 Danio rerio protein_coding NOVEL, 6323 bp
GTTATATAAGACTTGCTCGCTGAATTTCGACAAAATGATA
GTTTTGATACAGGCATTCGAGTAAGAAAAACGTTATACTT
GCTACCTTTTAATTGTAAACGAAGGCAGGTAGACTTAAAA
ATAGACTCGACTTTACGCGCGTGTTTGTGGTGGAGACACG
TTGACCGGTGATGGAGTGGCGACCGCAGTCTACTGTGGAC
TATGAGACTGTTTACTCAGAAGCACAGAGATGGATTGAGG
CAGTCACTAAGAAGAAGTTTGGGAACAGTAATTTCCGTAG
TTCTCTGGAGAATGGACTACTGTTGTGTGATCTGATCAAC
AAGATCAAACCTGGCATCATCAAGAAACTAAACAGATTTT
CCACACCTATTGCTGGCCTGGACAACATCAACCTCTTCCT
AAAAGCCTGCGCTAAGCTTGGACTAAAAGAAGCACAGCTT
TTCCACCCAGGAGACCTGCAAGACTTATCCACACGTGTGA
CTGTCAAGCACCAGGAGAGCAGCAGGAGGCTCAAAAATGT
TCTAATCACCATATATTGGTTGGGCAGAAAGGCACATGCT
GATCCATTTTATAATGGACCTTACCTAAAACTGAAGGCTT
TCGAGGGATTACTTGGCACCACACTATATAAGGCTCTAGA
GGATTGCACATCACTGCGGGCCAGTGTGCCAAACCGCTCT
TATCCAGATAGCTGGTACTCAGAGAGAGAAGAGCTCTTCC
CGCTGCGGGCCGGACACAGGAGAGAAGACTCTCTAGACAG
CCTCAATTCGCTGGGCTCCAGGACCTATAGCACATCCTCA
GACGCCACACTCAAAGGCAGCAGCGAGGGTTGTGGCAGTG
ACCCTGAAGCAGATCTGAGCTTCACCATGGCAGACAATAA
GGAGTACCGCCGTTCACAGGTCATAGCACCTAAGACTACT
ACTCAGTTCAATCAGTTTCTCCCATCACGGGACAAGCAGT
CCGGCTATGTTCCAGCACCATTACGCAAGAAACGTGCAGA
GCGAAATGAAGACAGCAGAAGAAGCTGGGCAAGCCCTATG
TTCACAGAAGATGACGGCACTTTCACTAGTCCCAGTCCTG
AAATGGCAGGTTCAGACTCTTCATCTTTGACCGGGTTGAA
ATCTCAGACAGCAGCCCACCAGGCTTCAGTTTATGAGTAT
GAGAGCAGTGATTCAGATGCAGATCGACCGGATCCTGATG
TGGTTCTAGATGACCTCGCTAGTCGTAGATTTCACAGCCC
TTCTCCTGTCGCTCCGACCAACTTTGCCTTACCCATGAGC
CCACTGGAGGCAACTGCTGTCCCATGCACCACCAGACCCC
ATGTGCTCATCAGTAATGTGCCCCGGCAGACAATGACCCA
TCTCAGCAGTCAGTCACAGTCTCTTCAGAGGACTTACAGG
AGGCCAGAATCTGCCGATGTCTGCATTTATGATGACTCTG
AGGAGGAGGACGATGAGTTTGGCTATGCCGATCCTGTTCA
AGATGACCTTTATGCCCGTAAAGTAGGCCTGATGCCTCAA
CTGTCTGCCTCGGTGCCTTTTGATAAATTTCTGCCCAAAT
TCTGGACACCTGAGGAGGATGCGCACATCAACAAGATCAA
ACTGGGTTCCCAGCGTCGGCCTTGGTACAGGAAGATCCAG
GGTTTCAGCCACAAGAAGTCAGGTTCGTCCTCGGAAGAAT
CAGACGGTGACGTCAATCCCTGGCCTTCTGTTCCCACTTT
CTCCCGCACTCAGTCTGAACCCCCTCGCTCTCACTCCCAT
TCACCCGAAGGCCTTGCCCTGCCAAGCCTCACTTCTACAC
ACAGTTCTCAAACACAACCCCTCACTGTTGCTCAGCAGAT
TGTCGGGCTGCCTAAATTTGAGCCACCTGATTTTTGGCCC
AGTCCAGATCCCTCCTCTGGCCCCAGACTCATAAAATGTG
AAAAGCATCCACTCCTTGGACGAGAACATCCTAATGACCC
GTACAACGTTTCTGCCGACATCCTGCCTGATTTGGAAAAT
GATGATATGTTTACACGGCGCACAAATGCCTTCCACTCGA
GCGATGACCTGGCCAAGCTGAAGTATGGAAACTTCCTTGT
GCCTCGCCGTAGATCAGAGGCAGATGTCACGGTGGTAATT
CAGCCTCATCACGAGGGCGAACCCGTGTATCCTGACATTG
AAAAAGACGATGTGGTTTCTAGAAAAGTTCAACAGCAAAT
CAGCCATCGCCCTCTGTCCGGGGCCCCTGATAACTACCAC
CCTGTTCCTATTCCAGAAACATGGGCTTTACCACCTAAAC
TGCAGGCCAAGCTGATGAGTGACCCAACTGAACCCAGACA
GAGCAGACCCAAAGCGGAGTTGAAACCGCATCTGAAAACA
GACGATATGCTGCTTAGGAAGCTGAGAGCTTTAAATACCC
AAGGAACGGAGGGCAGGAAAGCTGCCGGTGTTTCTTTGTC
TTGCAGTGAGGATGATATGCAGAAATGGCAGGCCATCAGA
GAGGCCAGTCGAGTGCGTTACCGGAAGAGGCTGATGGTGG
AGAGACTTTTCCAGAAAAACTCTGATAGTGAAGGGAGCAA
ATCAGTGAGCGACATTACAGAAAGTGAGATGAGCAACTCT
ACGATGGAGTTGCGTCTTGAGGAGCTGCAGAAGATGCGTA
ACCGTTTGAAGGAGAGTGAGGATAAGTGGCAAGATGATCT
TTCAAGGTGGAAGAGTAAGCGCAGGAGTGTCAATTCTGAC
ATTGTCAAGAAGAAAGAGGAGCGAGAGCAGATCGAGCAGA
TCACTTCAGTTGGCACCAGGAAATCAAAAACCTTCAAGGA
GATGCAGGATGAGAGAGAGAGCAGAGGGCAAAGCAACTTA
AGGGACAGCTTTAACTCCATCGTTGATGATGTCTTTGAAG
ATCCTGTTCCCCGAAGCAGAACTCTGCCCCCACGTAGCTA
CACCATTGACACTCCTTACACAGCCACAGACAAACCCTTT
GTACCCTCCATACCGTCACTCAGAGAAAAGGAACCTGTGG
CTGGAACCCTGGCATCAGATCAGACAGATTTATCCACCAA
ACCTGCTCGTGCCAGTCCTGATATCCCAGATAAAATTAAT
AATAGCAATCAGATGAGCCAAACAACGACCCAAAGTCTTC
TGGACGATCCCGTTCCTGCTTTTTCCAACAGCAGCACTAG
CCTGATTAAGCCAGCCAGTGCCACCAAGCCCACCAGCAGC
ACTAAACCCAACATCTCGGAGTTTATAAGCAACACTAAGC
CAGCTGAAAGCTCCAGTGACGCCATTAGCTCATTGTATAA
GCCCAATTCAATGGATACAAAGCCGTCTGGGCTGGATCAG
GTTTCTGCCTCCCTCCCGAAGATCTACCAGAGATCAGATA
GTGCAAGACTCACCTCTGTAGTCATGCCCAGGCCATTCGG
CACACAGTCCAACAGAATTGCCTCCCTTCCCAGAGCGTTC
ACGATGGATGACTCTGTTAAACGCACAAATGGAGAGAGCA
ACAGCCTTAAGAAAACGGCAGTTCAAAACCGCTATGCTCA
GTACATGACAGATGAAGACAAGTCCCAGCAAACCCCTGAT
CACAGCAGCGAAGAAGAGGAAGTGGAGAGAACCCAATCTC
CTGTCCCTCCGGTCAACAGGGTATCCCCCTTGCCCAAATC
TACATCCCCACTCAACCCTCCCAATGAGGTGGGCTACAAT
GAGATGAGGATCAGCCTGAACCAGAAGCCCAACAGCAGTC
GAGACTTCGGCTTCCAGCATGACTGGGACTCCACAGGTGT
CCGTGTCAAATCTGTTGCTCCGGGCAGCCCAGCAGAGTTT
GGTCAAGTGCAGGCTGGAGATGAGATCCTAACAGTGAATG
GACACAGGGTGGCAGACATGAGCTACAGTGAGTGGAAGAA
CAGTATGGAGGAGGCCCTGCAGCAGGGCAGTCTACTTATG
GACATCCGCAGACAGGGAAAGAACAACTGGGGCAGAGACC
TACCTTCCCTTCCATATAAAAGCCATAAGACCATCAATCT
GACCAGTCTGGATCCTCTAGGTCCCTCCGAGCCATATCAC
ACCACCAGCCTGGACTTCACATCCCAACAATCCAAGGACG
CCGTTGTGAAATCTGTCAACGTCAGCTCACAGCCAGCTTA
TAATCATGGCTCAAATGGGATTAATGGTGCTTTCCGTGAG
GATTCAGAGAGTGTGAATAATAAAGAATCCATTTCTTTGA
AAAACTTAAAAAGGAGATCAGAGTTTTTTGAACAAGGTGG
ATCTGAAACACCGATTTTAAATGTTCCAGTGCCCTCCATC
ACTGCATCCACTACACGCTGGTCCTGGGACCCAGAAGAAG
AGCGCAAGCGACAGGAGAAGTGGCAGAAAGAGCAGGATCG
TTTGCTGAAGGAGAAGTACAAAAAAGACCAAGAAAAACTT
GACGAGGAGTGGAAAAAGGCACAGCAGGAGCTTAACAAGG
AGAACTTCAAAAATGATGAGGAGCTGAACAGACACTCTCT
GTCCACCATCAGACAACCTACTGTTTCATGGGAAGAGCAG
AATGCCTCCAAACTGGCCCAAATAGAAGAAGACAAAAAGA
AAAGACAAGAGGAGATGCAGCGTTTAGAGGAAGAGAGGAG
AAAACGAGAGGAAGAGATGCTGCGTTTACAGGAAGAGAGG
AGGAAACAGGAGGAACAACAGCGTCTTGAGGAGGAGAAGA
GGAAGAAAGAAGAAGAGGAAAGGAAGAAACAAATAGAGGA
GAAGCAGCGTTTAGAGGAGGAGAGGAGGAGGAGAGAGGAA
CAACAGCGTCTGGAGGAACTGAGGAGGAAGAGGGAAGAGG
AACAGCGCCTCCTTCAGGAGAAAGAGCGGAACAGAAGAGA
GGAGGAGAAGAAGAGATTTCAGGAGCAAGATAAGGTGGAC
TCCTTTTGCTATACCAATGTTTACCCTGAATTATCCTACT
CACACAGGTCCATTTCCAAATCTACCCCAGAACTTGATGA
AGTTGCAAAAACAGATATTAAAGCAAGCGGTGGTCTGAGT
GAGGTCAACAGGGACTATCAGAAAGAGCCTCTAACTCAGT
CTGAGCTGGAGAGGCAGCAGATCCTTCAGGAAATGAGGAA
GAAAACTTCCCTGAACACAGACAACAGCTGGATTCGCCAG
AGCACTTCTAGTGTCCCTGCCAAAGAGCCAATCGATCTAC
CCATAAGAAGAGGTGAGTCTCTTGACAACCTTGATGAGCC
TCGTTCCTCCTGGAGATCATCATGGAGCACGTCAAACAGC
ACCTCGTCCATACCAGACTATAGCCGGCCACATTCAGCCC
TCTCTGGCTCCACATTGCAGCCGGCTGGACGTCCAGGCTC
TGCCACTATGCAGGCATCTCAATCCATGAGCTCTCTCAGG
CAGTCCACTTCCACACCTGCAAACCCACCAGAGCCTCGAG
CTCCACAGAGAAACAGGTCAGTGAGTGGCAGGAAAATCTG
TTCATTCTGTGATACACCGCTGGGCAAAGGAGCAGCCATG
ATCATCGAGTCCCTGGGGCTTTGTTATCATTTGACTTGTT
TCAAGTGTTCTGACTGCAGGTCTGATCTGGGAGGCTCACA
AGCAGGAGCAGAAGTCAGAATACGAAACCAGCAGCTCTAT
TGTAACGTCTGCTATATGCGGCTCAAAACTGGGCAGCCCA
CAGCCATGTGATCTCGCTGTACTGCAGCAGATCCAGGAGG
AACCAATCACAGACAAGGAACTATTAACGCTCAAGATTGA
TGAATACTAGGGGATTTCACCAGCCTTGATTATTCAGCGT
GCTTCTGTTCTTCTTCTCTTTTTTTACAGAGATTCCTAAG
GTTGTTTATTTGAATTTAAGTATTAGTAATTGTTTGTACA
AAAAAGAAATGCATGTACCTGAAAATATGAGCTATGCATT
TTGAAATGTACACAGGCTTGTTTTTTGAGCATTCATAATT
CATCCACTGTCTTTTGGAAATTCTTTTTGATTTCTGGCTG
TTTAAGTGATGTCTGTACGGCCCAAAAAGTGTTTATAGGA
ATTATTAGAGATATGCTATTTTAATTTTTAATGCTTATAG
TATATAGGTTTCTCCTGCAGTTTGTGCTATATAAGGGTTT
GTTGACTAAAATATCCTGTTATTCCATTTCATCTGTGCCT
TTTTGTGTTCTGGTGGGGAAAGATGATTAAGGATAAATCC
ATTAAGAATTTAAGAGTGGCACGGTTAGTAAGCAGCGCTC
ATGAGATATACATATTGCATTGGTAGCACCTATTTTATGC
AATGTCTCTGCAAGGGGGAAGATGGATCTAGAACAAAAGC
AGCATATTTAGTAATAATTGTAAATAAAATTGCCAAACTA
TAA

lmo7a TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA lmo7a-003 (1) 962
lmo7a-004 (1) 914
lmo7a-005 (1) 733
lmo7a-007 (1) 824
lmo7a-008 (1) 740
lmo7a-012 (1) 895
lmo7a-013 (1) 853
mRNA lmo7a-201 6323
lmo7a-202 (1) 812
aberrant processed transcript lmo7a-203 (1) 625
mRNA lmo7a-204 (1) 1052
lmo7a-210 (1) 663
lmo7a-212 (1) 754
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
lmo7a-201 Contained in:
OTHER lmo7a-201 TRANSCRIPT PAGES
  • Vega_Trans:OTTDART00000034642 (1)
  • Ensembl_Trans:ENSDART00000009920 (1)
  • PROTEIN PRODUCTSNo links to external site
    ZEBRAFISH SUPPORTING SEQUENCES
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:BC091872 (1) 1365bp
    GenBank:EH511722 (1) 824bp
    GenBank:DT057797 (1) 746bp
    GenBank:BI864331 (1) 559bp
    GenBank:AL924585 (1) 539bp
    GenBank:BE017585 (1) 530bp
    GenBank:EB933995 (1) 492bp
    GenBank:EB936649 (1) 443bp
    GenBank:AI601725 (1) 415bp
    CITATIONS (2)