ZFIN ID: ZDB-GENE-990415-44
Gene Name: cytochrome P450, family 26, subfamily A, polypeptide 1
Gene Symbol: cyp26a1
Sequence Ontology ID : SO:0000704

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Previous Names: cb24 (1), etID42255.12 (1), gir, giraffe, id:ibd5061 (1), P450RAI, wu:fb81e05 (1)

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 85 figures from 53 publications
Directly Submitted Expression Data: 6 figures (61 images) from Thisse et al., 2001 [cb24]
  3 figures (4 images) from Kudoh et al., 2001 [ibd5061]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  anatomical structure, anterior lateral plate mesoderm, anterior neural plate, anterior presumptive neural plate (all 82) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
rw716 Point Mutation Unknown Unknown ENU
sa1738 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-cyp26a1 (1), MO2-cyp26a1 (1), MO3-cyp26a1 (1), MO4-cyp26a1 (1), MO5-cyp26a1 (1)
    PHENOTYPE
    Data: 4 figures from 4 publications
    Observed in: anterior/posterior pattern specification involved in pronephros development, blood, blood circulation, eye (all 18) expand
    DISEASE ASSOCIATED WITH cyp26a1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to vitamin A (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function retinoic acid 4-hydroxylase activity (more)
    GO Terms (all 33)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001128 (1)
  • InterPro:IPR002401 (1)
  • InterPro:IPR017972 (1)
  • PROSITE:PS00086 (1)
  • Pfam:PF00067 (1)
  • EC:1.14.13.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cyp26a1-001 (1) 1830
    cyp26a1-002 (1) 835
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIES
    Ab1-cyp26a1 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cyp26a1
    tg(-83cyp26a1-gata2a:egfp), tg(-195cyp26a1:egfp), tg(-222cyp26a1-gata2a:egfp), tg(-310cyp26a1-gata2a:egfp), Tg(cyp26a1-RARE_mut:EYFP) (all 9) expand
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    cyp26a1Contained in: [BAC] DKEY-185B14 (1) (order this)
    cyp26a1Encodes: [EST] cb24 (1) (order this), fb81e05 (1) (order this), ibd5061 (1) (order this)
    [cDNA] MGC:63750 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131146 (1) 1848bp
    Genomic GenBank:BX323992 (1) 153572bp
    Select Tool
    Polypeptide UniProtKB:P79739 (1) 492aa
    Sequence Clusters UniGene:75754 (1)
    Sequence Information (all 18)
    OTHER cyp26a1 GENE PAGES
  • Gene:30381 (1)
  • VEGA:OTTDARG00000020512 (1)
  • Ensembl(GRCz10):ENSDARG00000033999 (1)
  • ORTHOLOGY for cyp26a1 (Chr: 12)
    CITATIONS (135)