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ZIRC
ZFIN ID: ZDB-GENE-070912-179
Gene Name: chromodomain helicase DNA binding protein 7
Gene Symbol: chd7
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch211-197o6.2 (1), wu:cegs2051 (1), wu:fb37f10 (1), wu:fb39h04 (1), wu:fd19h06 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity and hydrolase activity, acting on acid anhydrides. Involved in several processes, including animal organ development; nervous system development; and  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ck004a Small Deletion Exon 2 Unknown ZINC_FINGER_NUCLEASE
hsi3 Small Deletion Exon 2 Frameshift CRISPR
la011094Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014852Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023507Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023508Tg Transgenic Insertion Unknown Unknown DNA
    la028757Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa596 Point Mutation Unknown Premature Stop ENU
    sa6835 Point Mutation Unknown Splice Site ENU
    sa11593 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19732 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19733 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32898 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32899 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39811 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44529 Point Mutation Unknown Unknown ENU
    sa44530 Point Mutation Unknown Unknown ENU
    Targeting reagents:
    PHENOTYPE
    Data: 48 figures from 8 publications
    Observed in:
    DISEASE ASSOCIATED WITH chd7 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    CHARGE syndrome CHARGE syndrome 214800
    hypogonadotropic hypogonadism 5 with or without anosmia Hypogonadotropic hypogonadism 5 with or without anosmia 612370
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cranial skeletal system development (more)
    Cellular Component nucleus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 30)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA chd7-003 (1) 494
    mRNA chd7-202 (1) 515
    chd7-203 (1) 10963
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chd7 No data available
    MARKER RELATIONSHIPS
    chd7Contained in: [BAC] CH211-197O6 (1) (order this)
    chd7Encodes: [EST] cegs2051 (1) (order this), fb37f10, fb39h04, fd19h06
    chd7Has Artifact: [EST] fc87d04
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_692864 (1) 10825bp
    Genomic GenBank:CR450710 (1) 201624bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QGL1 (1) 3140aa
    Sequence Clusters UniGene:116391 (1)
    Sequence Information (all 53)
    ORTHOLOGY for chd7 (Chr: 2)
    CITATIONS (32)