ZFIN ID: ZDB-GENE-040426-2706
Gene Name: serine and arginine rich splicing factor 2a
Gene Symbol: srsf2a
Sequence Ontology ID : SO:0000704

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Previous Names: sfrs2, srsf2, hm:zeh0252, wu:fb51a05, wu:fk59b08, zgc:56283

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56283]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la012192Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35331 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH srsf2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH srsf2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of RNA splicing (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR003954 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR034893 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA srsf2a-001 (1) 1776
    ncRNA srsf2a-002 (1) 1024
    mRNA srsf2a-003 (1) 1151
    aberrant processed transcript srsf2a-004 (1) 567
    srsf2a-005 (1) 603
    srsf2a-006 (1) 582
    mRNA srsf2a-007 (1) 707
    srsf2a-008 (1) 855
    aberrant processed transcript srsf2a-009 (1) 908
    ncRNA srsf2a-010 (1) 636
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM srsf2a No data available
    MARKER RELATIONSHIPS
    srsf2aContained in: [BAC] CH211-134H7 (1) (order this)
    srsf2aContains: [SNP] rs3728510 (1), rs3728511 (1)
    srsf2aEncodes: [EST] fb51a05, fk59b08, zeh0252
    [cDNA] MGC:56283 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213382 (1) 1796bp
    Genomic GenBank:CR352342 (1) 186937bp
    Select Tool
    Polypeptide UniProtKB:Q7ZV13 (1) 225aa
    Sequence Clusters UniGene:76609 (1)
    Sequence Information (all 21)
    OTHER srsf2a GENE PAGES
  • Alliance (1)
  • Gene:406691 (1)
  • VEGA:OTTDARG00000020615 (1)
  • Ensembl(GRCz11):ENSDARG00000057484 (2)
  • ORTHOLOGY for srsf2a (Chr: 12)
    CITATIONS (24)