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ZFIN ID: ZDB-FIG-130123-70
Bhat et al., 2013 - A gene network that coordinates preplacodal competence and neural crest specification in zebrafish. Developmental Biology   373(1):107-117 Full text @ Dev. Biol.
ADDITIONAL FIGURES
EXPRESSION / LABELING:
Genes:
Fish:
Condition:
Knockdown Reagents:
Anatomical Term:
Stage: Bud

Fig. 6 A network of auto- and cross-regulation amongst competence factors. Changes in expression levels of PPE regulatory genes near the end of gastrulation following misexpression or knockdown of the indicated genes. A-F, 10 hpf wholemount expression patterns of foxi1 (A-C) and gata3 (D-F) in control embryos (A, D), hs:tfap2a transgenic embryos (B and E), a foxi1 morphant (D) and a gata3 morphant (F). G–K, Quantitative real time PCR measurements of relative mRNA abundance for foxi1 (G), gata3 (H), tfap2a (I), tfap2c (J), and dlx3b (K) in the indicated backgrounds. Expression levels were normalized relative to wild-type controls, which are represented by dashed lines set at a value of 1.0. Genetic backgrounds are color coded to facilitate comparison between data sets: Black, tfap2a/c morphants; white, tfap2c morphants; gray, foxi1 morphants; green, gata3 morphants; red, foxi1-gata3 morphants; brown, hs:tfap2a; yellow, hs:foxi1; blue, hs:gata3. Data represent means of three independent experiments, each performed at two different dilutions, each measured in triplicate. The effects of gene misexpression were assayed at 10 hpf following heat shock at 7 hpf, and corresponding wild-type controls were also heat shocked at 7 hpf. Error bars represent standard deviations. Asterisks indicate statistically significant differences from the controls, as measured by t-tests. L, Model and summary of functional relationships between PPE competence factors and the general PPE marker, dlx3b. Arrows indicate positive regulation, cross-bars indicate negative regulation, and arrows with cross-bars indicate ambiguity in the data. Specifically, tfap2a and tfap2c are slightly upregulated in gata3 morphants but are strongly downregulated in foxi1-gata3 morphants.

Gene Expression Details
Gene Antibody Fish Conditions Stage Anatomy Assay
foxi1 WT control Bud neurogenic field ISH
WT + MO2-foxi1 standard conditions Bud neurogenic field ISH
x24Tg heat shock Bud neurogenic field ISH
gata3 WT control Bud neurogenic field ISH
WT + MO2-gata3 standard conditions Bud neurogenic field ISH
x24Tg heat shock Bud neurogenic field ISH
Antibody Labeling Details No data available
Phenotype Details No data available
Acknowledgments:
ZFIN wishes to thank the journal Developmental Biology for permission to reproduce figures from this article. Please note that this material may be protected by copyright.

Reprinted from Developmental Biology, 373(1), Bhat, N., Kwon, H.J., and Riley, B.B., A gene network that coordinates preplacodal competence and neural crest specification in zebrafish, 107-117, Copyright (2013) with permission from Elsevier. Full text @ Dev. Biol.