ZFIN ID: ZDB-GENE-990415-82
Gene Name: GATA binding protein 3
Gene Symbol: gata3
Sequence Ontology ID : SO:0000704

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Previous Names: gta3 (1), cb550 (1)

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 69 figures from 40 publications
Directly Submitted Expression Data: 6 figures (29 images) from Thisse et al., 2001 [cb550]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
  anatomical structure, basal plate midbrain region, chondrocranium cartilage cranial neural crest, cloaca (all 49) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b1075 Point Mutation Exon 4 Missense
sa20285 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa40301 Point Mutation Unknown Premature Stop ENU
    sa40302 Point Mutation Unknown Splice Site ENU
    sa40303 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: MO1-gata3 (1), MO2-gata3 (1), MO3-gata3 (1), MO4-gata3 (1)
    PHENOTYPE
    Data: 9 figures from 4 publications
    Observed in: adenohypophyseal placode, anatomical structure, embryonic neurocranium morphogenesis, epibranchial field (all 19) expand
    DISEASE ASSOCIATED WITH gata3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    hypoparathyroidism-deafness-renal disease syndrome Hypoparathyroidism, sensorineural deafness, and renal dysplasia 146255
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fibroblast growth factor receptor signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 27)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000679 (1)
  • InterPro:IPR013088 (1)
  • InterPro:IPR016374 (1)
  • InterPro:IPR029521 (1)
  • PROSITE:PS00344 (1)
  • PROSITE:PS50114 (1)
  • Pfam:PF00320 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gata3-001 (1) 2576
    ncRNA gata3-002 (1) 685
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gata3
    Tg(gata3:AmCyan), Tg(HSE-CMV:gata3,EGFP), Tg(hsp70l:gata3)
    MARKER RELATIONSHIPS
    gata3Contained in: [BAC] DKEY-268B12 (1) (order this)
    gata3Encodes: [EST] cb550 (1) (order this)
    [cDNA] MGC:194063 (1) (order this), MGC:194082 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131211 (1) 2576bp
    Genomic GenBank:BX901908 (1) 210697bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DGG5 (1) 438aa
    Sequence Clusters UniGene:77524 (1)
    Sequence Information (all 30)
    OTHER gata3 GENE PAGES
  • Alliance (1)
  • Gene:30458 (1)
  • VEGA:OTTDARG00000008293 (1)
  • Ensembl(GRCz10):ENSDARG00000016526 (1)
  • ORTHOLOGY for gata3 (Chr: 4)
    CITATIONS (102)