ZFIN ID: ZDB-GENE-990415-109

Mapping Details

Gene Name: homeobox B9a
Symbol: hoxb9a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 3 23,677,351 - 23,682,436 GRCz11
Ensembl 3 23,677,351 - 23,682,436 GRCz11
Vega 3 23,546,803 - 23,551,888 GRCv10
NCBI Map Viewer 3 23,677,351 - 23,682,436 GRCz11
UCSC 3 - GRCv10
Mapped Clones containing hoxb9a
CH211-72A16 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa14877 3 23,677,905 GRCz11 Busch-Nentwich et al., 2013
3 23,547,357 GRCz10 Busch-Nentwich et al., 2013
3 23,969,146 Zv9 Busch-Nentwich et al., 2013
sa17045 3 23,678,016 GRCz11 Busch-Nentwich et al., 2013
3 23,547,468 GRCz10 Busch-Nentwich et al., 2013
3 23,969,257 Zv9 Busch-Nentwich et al., 2013
sa31325 3 23,680,640 GRCz11 Busch-Nentwich et al., 2013
3 23,550,092 GRCz10 Busch-Nentwich et al., 2013
3 23,971,881 Zv9 Busch-Nentwich et al., 2013
la015133Tg 3 23,972,323 - 23,972,333 Zv9

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 181.81 cR hoxb9a Loeb/NIH/5000/4000 (LN54) Johnson, Stephen L. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
hoxb8a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb5a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb4a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
eve1 GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb2a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb6a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb1a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb10a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb7a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
hoxb3a GENE 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1, hoxb10a, hoxb9a, hoxb8a, hoxb7a, hoxb6a, hoxb5a, hoxb4a, hoxb3a, hoxb2a, and hoxb1a are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG03.
dlx4a GENE 3 Sumanas et al., 2001 Sumanas et al (Genesis 30:114-118, 2001) mapped the fzd2 gene to the marker  ...
z22516 SSLP 3 Sumanas et al., 2001 Sumanas et al (Genesis 30:114-118, 2001) mapped the fzd2 gene to the marker  ...
fzd2 GENE 3 Sumanas et al., 2001 Sumanas et al (Genesis 30:114-118, 2001) mapped the fzd2 gene to the marker  ...

OTHER MAPPING INFORMATION
Chr 3 Amores et al., 1998 Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report eve1,  ...
Chr 3 Sumanas et al., 2001 Sumanas et al (Genesis 30:114-118, 2001) mapped the fzd2 gene to the marker Z22516, between the  ...
Markers Encoded by hoxb9a
fc06b03 Chr: 2 Details