Gene

sestd1

ID

ZDB-GENE-030801-1

Name

SEC14 and spectrin domains 1

Symbol

sestd1 Nomenclature History

Previous Names

sol
cb248 (1)
sb:cb248
si:dz106a20.1
si:dz106a20.2
si:dz42h5.2

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Involved in blood vessel morphogenesis. Is expressed in axial chorda mesoderm; myotome; notochord; retinal inner nuclear layer; and somite. Orthologous to human SESTD1 (SEC14 and spectrin domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2001

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

cb248 (10 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Jin et al., 2007
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With sestd1 Human Ortholog

No data available

Associated With sestd1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001251	CRAL-TRIO lipid binding domain
Repeat	IPR018159	Spectrin/alpha-actinin

Domain Details Per Protein

Protein	Length	CRAL-TRIO lipid binding domain	Spectrin/alpha-actinin
UniProtKB:Q7SX85 InterPro	714

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ottdart00000001900 (1)	Havana	1069 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000001901 (1)	Havana	1577 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000001966 (1)	Havana	1018 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sestd1-201 (1) Ensembl	Havana	3236 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sestd1-202 (1) Ensembl	Havana	800 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sestd1-205 (1) Ensembl	Havana	3280 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sestd1-002 (1) Ensembl	Havana	707 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sestd1-003 (1) Ensembl	Havana	492 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations