FIGURE

Fig 2

ID

ZDB-FIG-210313-2

Publication

Cabrera-Quio et al., 2021 - Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition

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Fig 2

Zebrafish Ski7 interacts with the cytoplasmic exosome.

(A) mRNA expression levels of ski7 (purple), subunits of the cytoplasmic RNA exosome (orange) and the SKI complex (green). PolyA⁺ RNA-seq during oogenesis (oocyte stages I-IV), mature eggs (unactivated, activated, fertilized) and embryogenesis (2–4 cell, 256 cell, 1000 cell, oblong, dome, shield, bud, 1 dpf, 2 dpf, 5 dpf [34]); TPM, transcripts per million. (B) Ski7 associates with the cytoplasmic exosome in early embryos. Volcano plot of Ski7-P4-like peptide-interacting proteins from wild-type zebrafish embryo lysates (128-512-cell stage) identified by mass spectrometry. Subunits of the cytoplasmic exosome (orange) are enriched, while nuclear exosome auxiliary factors (blue) and the SKI complex (green) are not enriched.

Expression Data

Genes:	dis3l exosc1 exosc2 exosc4 exosc5 exosc6 exosc7 exosc9
Fish:	WT
Anatomical Term:	whole organism
Stage:	256-cell

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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