ZFIN Transcript: dmd-008

ZFIN ID: ZDB-TSCRIPT-091110-507

ZFIN ID: ZDB-TSCRIPT-091110-507

Transcript Name:

dmd-008

Previous Names:

ch211-227l2.4-001, ottdart00000044469

Transcript Type:

ncRNA

Annotation Status:

Strain:

Non Reference Strains:

Associated with Genes:

dmd (1)

SEQUENCE

OTTDART00000044469 (1) [ Show ] (double-click sequence to select)

[Download]

Select Analysis Tool

ZFIN BLAST

NCBI BLAST

Ensembl

UCSC BLAT

>tpe|OTTDART00000044469|OTTDARG00000031909|ZDB-GENE-010426-1 dmd|no_translation dmd-008 LG_none BX323090.7,BX004756.8,BX323020.9 Danio rerio protein_coding KNOWN, 780 bp
CAGGCTAGCTGAAATGGAGAACCGAAATGGCTCGTATGTG
AATGACAATGTATCGCCCAATGAAAGCATGGATGATGAGC
ATCTGCTGATCCAGCACTACTGCCAGAGTCTGAATCAAGG
CTCTCCTCTCAGCCAGCCGCAGAGCCCCGCTCAGATCCTC
ATCTCAATGGAGACTGAAGAGAAGGGAGAGCTGGAGAGAG
TGCTCAATGATCTGGAGCAGGAAAACAGGAAGCTGCAAGC
GGAGTACGATCGTCTGAAAAAGGCACACGATCACAAGGGT
CTGTCACCGTTGCCTTCACCTCCACAGATGCTTCCGGTGT
CGCCTCAAAGTCCACGCGACGCAGAACTAATCGCAGAAGC
CAAACTACTGCGGCAACACAAGGGACGATTGGAGGCAAGA
ATGCAAATCCTGGAGGATCACAACAAGCAGCTGGAATCGC
AGCTTACACGCCTAAGACAGTTACTCGAGCAGGTGATGAT
GAGCTGTCCAGTCCCACCCAGGATGCAAGCACTGGATTAG
AAGACGTCATCGAGCAGCTCAACAACTCCTTCCCTCACAG
CCAAGGAGGCGGACGGCTAAATCCATGAGAGGTCCCAATG
TGGGAAGTCTTTTCCACATGGTTGATAACATTGGACATGC
CATGGAGTCGCTGGTTCATGTAATAACAGAGGAGCAGGAT
TTAGACTGAAGACGTCTTCTCCTCGTTGCATGCTTTTGTA
GTGTCAACAACTGGACCGGATATGTTTACAATGGGGAATA
TCAATAAAAATCTATTTTTC

dmd TRANSCRIPTS
Type	Name	Length (nt)	Analysis
mRNA	dmd-201 (1)	3488	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-202 (1)	2163	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-203 (1)	11030	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-205 (1)	1196	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-209 (1)	722	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-211 (1)	579	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	dmd-005 (1)	696	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-006 (1)	708	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-007 (1)	676	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dmd-008	780
	dmd-009 (1)	530	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

dmd-008 Contained in:

[BAC] CH211-59A4 (1) (order this), CH211-274B7 (1) (order this), DKEY-9K8 (1) (order this)

Genome Resources: Vega_Trans:OTTDART00000044469 (1), Ensembl_Trans:ENSDART00000138275 (1)

PROTEIN PRODUCTS No links to external site

ZEBRAFISH SUPPORTING SEQUENCES

Type	Accession #	Length (bp/aa)	Analysis
RNA	GenBank:EH600386 (1)	797 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH600146 (1)	670 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

CITATIONS (2)

Add new Alias

Attributions for Alias: {{control.newAlias}}

Delete Alias: