ZFIN ID: ZDB-GENE-980526-176
Gene Name: cyclin D1
Gene Symbol: ccnd1
Sequence Ontology ID : SO:0000704

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Previous Names: cycd1 (1), cb161 (1), etID37810.7 (1), fb52e01, fc45c08, fc83a12, id:ibd1198, wu:fb52e01 (1), wu:fc45c08, wu:fc83a12 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 85 figures from 58 publications
Directly Submitted Expression Data: 6 figures (32 images) from Thisse et al., 2001 [cb161]
  3 figures (3 images) from Kudoh et al., 2001 [ibd1198]
  6 figures (16 images) from Rauch et al., 2003 [fc83a12]
Wild-type Stages, Structures: Cleavage:16-cell (1.5h-1.75h) to Adult (90d-730d, breeding adult)
  anatomical structure, basal plate midbrain region, blood, brain (all 48) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016165Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016166Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026147Tg Transgenic Insertion Unknown Unknown DNA
    sa14707 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21083 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34190 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-ccnd1 (1)
    PHENOTYPE
    Data: 2 figures from Duffy et al., 2005
    Observed in: eye, head, retina cell, retinal inner plexiform layer
    DISEASE ASSOCIATED WITH ccnd1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    colorectal cancer {Colorectal cancer, susceptibility to} 114500
    multiple myeloma {Multiple myeloma, susceptibility to} 254500
    von Hippel-Lindau disease {von Hippel-Lindau syndrome, modifier of} 193300
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of neural retina development (more)
    Cellular Component transcriptional repressor complex (more)
    Molecular Function transcription corepressor activity (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004367 (1)
  • InterPro:IPR006671 (1)
  • InterPro:IPR013763 (1)
  • InterPro:IPR015451 (1)
  • InterPro:IPR036915 (1)
  • PROSITE:PS00292 (1)
  • Pfam:PF00134 (1)
  • Pfam:PF02984 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ccnd1-001 (1) 2742
    ccnd1-002 (1) 840
    aberrant processed transcript ccnd1-003 (1) 881
    ncRNA ccnd1-004 (1) 673
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-ccnd1 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ccnd1 No data available
    MARKER RELATIONSHIPS
    ccnd1Contained in: [BAC] CH211-188I17 (1) (order this)
    ccnd1Contains: [SNP] rs3728104 (1)
    ccnd1Encodes: [EST] cb161 (1) (order this), fb52e01 (1), fc45c08, fc83a12 (1) (order this), ibd1198 (order this)
    [cDNA] MGC:86577 (1) (order this), MGC:173833 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131025 (1) 2479bp
    Genomic GenBank:AL929586 (1) 154808bp
    Select Tool
    Polypeptide UniProtKB:A7YYE4 (1) 291aa
    Sequence Clusters UniGene:75056 (1)
    Sequence Information (all 36)
    OTHER ccnd1 GENE PAGES
  • Alliance (1)
  • Gene:30222 (1)
  • VEGA:OTTDARG00000016625 (1)
  • Ensembl(GRCz10):ENSDARG00000101637 (1)
  • ORTHOLOGY for ccnd1 (Chr: 7)
    CITATIONS (163)