ZFIN ID: ZDB-GENE-060503-672
Gene Name: si:ch211-173p18.3
Gene Symbol: si:ch211-173p18.3    Nomenclature History

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Previous Name: si:ch211-173p18.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of cell morphogenesis and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZMYM4 (zinc finger MYM-type containing 4).
Genome Resources: Alliance (1),  Gene:553317 (1),  Ensembl(GRCz11):ENSDARG00000035821 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-173p18.3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-173p18.3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell cycle (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:ch211-173p18.3-202 (1)    Ensembl 727
si:ch211-173p18.3-203 (1)    Ensembl 5133
si:ch211-173p18.3-206 (1)    Ensembl 784
ncRNA si:ch211-173p18.3-003 (1)    Ensembl 755
si:ch211-173p18.3-005 (1)    Ensembl 583
si:ch211-173p18.3-007 (1)    Ensembl 845
si:ch211-173p18.3-008 (1)    Ensembl 917
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:ch211-173p18.3 No data available
MARKER RELATIONSHIPS
si:ch211-173p18.3 Contained in: [BAC] CH211-173P18 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001044320 (1) 3791 nt
Genomic GenBank:BX510986 (1) 157245 nt
Select Tool
Polypeptide UniProtKB:F6NVC8 (1) 1360 aa
Sequence Information (all 33)
ORTHOLOGY for si:ch211-173p18.3 ( Chr: 19 )
CITATIONS (19)