ZFIN ID: ZDB-GENE-041121-11
Gene Name: protein tyrosine phosphatase 4A1
Gene Symbol: ptp4a1
Sequence Ontology ID : SO:0000704

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Previous Names: PRL-1 (1), fb54d08, fc01c04, wu:fb54d08, wu:fc01c04, zgc:101726

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tyrosine phosphatase activity; predicted to be involved in protein dephosphorylation; predicted to localize to the cytoplasm and nucleus; orthologous to human PTP4A1  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101726]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35037 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ptp4a1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptp4a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dephosphorylation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function phosphatase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000242 (1)
  • InterPro:IPR000340 (1)
  • InterPro:IPR000387 (1)
  • InterPro:IPR003595 (1)
  • InterPro:IPR029021 (1)
  • PROSITE:PS50056 (1)
  • Pfam:PF00102 (1)
  • Pfam:PF00782 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ptp4a1-007 (1) 942
    mRNA ptp4a1-201 (1) 2002
    ptp4a1-202 (1) 727
    ptp4a1-204 (1) 135
    aberrant processed transcript ptp4a1-205 (1) 806
    ptp4a1-206 (1) 1109
    mRNA ptp4a1-208 (1) 821
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptp4a1 No data available
    MARKER RELATIONSHIPS
    ptp4a1Contained in: [BAC] DKEY-23F9 (1) (order this)
    ptp4a1Encodes: [EST] fb54d08, fc01c04
    [cDNA] MGC:101726 (1) (order this), MGC:192064 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007775 (1) 1940bp
    Genomic GenBank:BX324177 (1) 235038bp Blast at MegaBLAST
    Polypeptide UniProtKB:F8W283 (1) 203aa
    Sequence Clusters UniGene:28550 (1)
    Sequence Information (all 30)
    OTHER ptp4a1 GENE PAGES
  • Alliance (1)
  • Gene:493615 (1)
  • VEGA:OTTDARG00000034922 (1)
  • Ensembl(GRCz11):ENSDARG00000006242 (2)
  • ORTHOLOGY for ptp4a1 (Chr: 11)
    CITATIONS (19)