ZFIN ID: ZDB-GENE-040426-1798
Gene Name: serine and arginine rich splicing factor 7a
Gene Symbol: srsf7a    Nomenclature History

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Previous Names: fb39b02, wu:fb39b02, zgc:77155

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to nuclear speck. Orthologous to human SRSF7 (serine and arginine rich splicing factor 7).
Genome Resources: Alliance (1),  Gene:402972 (1),  Ensembl(GRCz11):ENSDARG00000035325 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:77155]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH srsf7a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH srsf7a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA cis splicing, via spliceosome (more)
Cellular Component nuclear speck (more)
Molecular Function metal ion binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript srsf7a-211 (1)    Ensembl 724
mRNA srsf7a-201 (1)    Ensembl 1407
srsf7a-204 (1)    Ensembl 952
srsf7a-205 (1)    Ensembl 873
srsf7a-206 (1)    Ensembl 1465
srsf7a-207 (1)    Ensembl 501
srsf7a-208 (1)    Ensembl 851
srsf7a-209 (1)    Ensembl 745
srsf7a-210 (1)    Ensembl 859
srsf7a-212 (1)    Ensembl 778
ncRNA srsf7a-006 (1)    Ensembl 516
srsf7a-007 (1)    Ensembl 849
srsf7a-012 (1)    Ensembl 875
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM srsf7a No data available
MARKER RELATIONSHIPS
srsf7a Contained in: [BAC] DKEY-85K8 (1) (order this)
srsf7a Encodes: [EST] fb39b02, tdsubc_2d5
[cDNA] MGC:77155 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_205673 (1) 1500 nt
Genomic GenBank:BX547938 (1) 162785 nt
Select Tool
Polypeptide UniProtKB:A0A0R4ID65 (1) 260 aa
Sequence Information (all 33)
ORTHOLOGY for srsf7a ( Chr: 5 )
CITATIONS (20)