ZFIN ID: ZDB-GENE-030909-11
Gene Name: phosphoenolpyruvate carboxykinase 1 (soluble)
Gene Symbol: pck1
Sequence Ontology ID : SO:0000704

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Previous Names: cb856 (1), cb924 (1), fj93h11, PEPCK (1), wu:fc51c05, wu:fj93h11, zgc:63869

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have manganese ion binding activity and phosphoenolpyruvate carboxykinase (GTP) activity; involved in ion homeostasis and response to glucose; predicted to localize to the cytosol and  ...
GENE EXPRESSION
All Expression Data: 41 figures from 24 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2001 [cb856]
  5 figures (5 images) from Thisse et al., 2001 [cb924]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: text only from Furukawa et al., 2015
Observed in:
DISEASE ASSOCIATED WITH pck1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
?Phosphoenolpyruvate carboxykinase deficiency, cytosolic 261680
DISEASE ASSOCIATED WITH pck1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process response to glucose (more)
Molecular Function GTP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008209 (1)
  • InterPro:IPR008210 (1)
  • InterPro:IPR013035 (1)
  • InterPro:IPR018091 (1)
  • InterPro:IPR035077 (1)
  • InterPro:IPR035078 (1)
  • PROSITE:PS00505 (1)
  • Pfam:PF00821 (1)
  • Pfam:PF17297 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pck1-001 (1) 2662
    ncRNA pck1-002 (1) 708
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pck1
    MARKER RELATIONSHIPS
    pck1Contained in: [Fosmid] CH1073-127N10 (1) (order this)
    pck1Encodes: [EST] cb856 (1) (order this), cb924 (1) (order this), fc51c05 (1), fj93h11
    [cDNA] MGC:63869 (1) (order this)
    pck1Has Artifact: [EST] fb65b06, fb65b11
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214751 (1) 2698bp
    Genomic GenBank:CU855794 (1) 41245bp
    Select Tool
    Polypeptide UniProtKB:F1QYH3 (1) 630aa
    Sequence Clusters UniGene:37928 (1)
    Sequence Information (all 19)
    OTHER pck1 GENE PAGES
  • Alliance (1)
  • Gene:378727 (1)
  • VEGA:OTTDARG00000034445 (1)
  • Ensembl(GRCz11):ENSDARG00000013522 (2)
  • ORTHOLOGY for pck1 (Chr: 6)
    CITATIONS (70)