Transcript

sltm-005

ID

ZDB-TSCRIPT-090929-10789

Name

sltm-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

sltm (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142723 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142723.4|gene_biotype:protein_coding|ENSDARG00000052728.9 transcript_biotype:retained_intron gene_symbol:sltm cdna chromosome:GRCz11:7:30543953:30553066:-1
TCTTTTGGTTTGGTTTGCCATTTTTTCAAGTTTGGTAATT
GGAGTTAAACGAGGAGATGAAAACACGTCTGTTACGCACA
CATTTCCAGCACTTGCTTTTCCAGTCCCTACTTATGGGTT
AAAAAAAGAGCAGTAGTTCCAGTGATGTCAGAGGGGTTTG
TCAGTCCAGTGAAGTCATTCTCTCTCAAGTTGAACACCCT
CCTGAGGATGTCATTGGTCAAGGGAATAAATTGGCAGAAA
ACCTGACCCACCTTGCTCCTGTGGAAAAGCAAGAAAAAGA
AGCCTTATTGGAGTTTTTGTCCGAATGCAAGCCTTGCCTA
TGGGGATTTATTTTTTCGTTCTTTTCCTTTTCTGTAATGC
ACCAAACATTTGTATAACCTTTGTTGTTTGTTTGTTTGGA
GCTGTACCTCGGTGCCCAAAGTCTTCTCTCATGCGCTTGT
ACTCATTACAGTATTTCTCTCTTCTTTTCGCTCTTGTAAT
ATTCACATTTTAGCTCTTCAAAAGACAGAGATGGAAAGGC
TGCGAAAGATGAAAAAGGAAGTGGCAGCAGCAGTACCAGC
TCTACTCGCAATCTGTGGGTGAGTGGCCTATCATCCAACA
CCAAAGCAGCTGATCTCAAGAACCTCTTTGGCAAATATGG
AAAGGTTTTTAGTGCCAAAGTGGTCACCAATGCTCGTAGC
CCAGGAGCTAAATGTTATGGATTAGTTACCATGTCGTCCA
GTGCAGAAGTGGCCAGGTGCATCTCTCATTTGGACCGCAC
AGAACTCCATGGACAACAAATATCTGTGGACAGGGTGAAA
ACTGACCCATTTAAAAAGGACTTCTCAAAAAAAGAGGCAG
AAGAAAAGGCGGCTTCCATTAAAATTTCTGGAGAAAAGCG
CACTCCAGTTGGAGCAAAACCTTCCAGCAAGACTCCAGTT
TCATCTAAGAAAGAGGAAAAGAAATCAGACAAACCCTTCG
AGAAGGACAGCAAAGACATCAAAAAACAGGACTCCAAAAG
CAACAAATCTGATGCACCTTCCAATTCTGGACCAGAGGCA
GCAAAGAAAGATGACAAGAAACATGGACGAAAGAGTCCAG
GCAATACAGTGCTCAACCAACCTAAAGGAGAGCAAATCTT
CAATAAATCTCGTCCTCCTTTTAGAAGGGGTGGGAGGTTT
GAGAAGCCTGGTCCACCCAACATGATGAACAGACGCCCCA
GATGGTTCGGACCACCTGATGAGATGGAGATGATGAAGAA
AGGGCGTCCCATGCCTAACAAAGGTGGCAATATTGAAATC
CTGCCATTTG

OTTDART00000028282 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000028282|OTTDARG00000022050|ZDB-GENE-040426-2647 sltm|no_translation sltm-005 LG_ AL935053.6 Danio rerio protein_coding KNOWN, 1125 bp
CCAGTGAAGTCATTCTCTCTCAAGTTGAACACCCTCCTGA
GGATGTCATTGGTCAAGGGAATAAATTGGCAGAAAACCTG
ACCCACCTTGCTCCTGTGGAAAAGCAAGAAAAAGAAGCCT
TATTGGAGTTTTTGTCCGAATGCAAGCCTTGCCTATGGGG
ATTTATTTTTTCGTTCTTTTCCTTTTCTGTAATGCACCAA
ACATTTGTATAACCTTTGTTGTTTGTTTGTTTGGAGCTGT
ACCTCGGTGCCCAAAGTCTTCTCTCATGCGCTTGTACTCA
TTACAGTATTTCTCTCTTCTTTTCGCTCTTGTAATATTCA
CATTTTAGCTCTTCAAAAGACAGAGATGGAAAGGCTGCGA
AAGATGAAAAAGGAAGTGGCAGCAGCAGTACCAGCTCTAC
TCGCAATCTGTGGGTGAGTGGCCTATCATCCAACACCAAA
GCAGCTGATCTCAAGAACCTCTTTGGCAAATATGGAAAGG
TTTTTAGTGCCAAAGTGGTCACCAATGCTCGTAGCCCAGG
AGCTAAATGTTATGGATTAGTTACCATGTCGTCCAGTGCA
GAAGTGGCCAGGTGCATCTCTCATTTGGACCGCACAGAAC
TCCATGGACAACAAATATCTGTGGACAGGGTGAAAACTGA
CCCATTTAAAAAGGACTTCTCAAAAAAAGAGGCAGAAGAA
AAGGCGGCTTCCATTAAAATTTCTGGAGAAAAGCGCACTC
CAGTTGGAGCAAAACCTTCCAGCAAGACTCCAGTTTCATC
TAAGAAAGAGGAAAAGAAATCAGACAAACCCTTCGAGAAG
GACAGCAAAGACATCAAAAAACAGGACTCCAAAAGCAACA
AATCTGATGCACCTTCCAATTCTGGACCAGAGGCAGCAAA
GAAAGATGACAAGAAACATGGACGAAAGAGTCCAGGCAAT
ACAGTGCTCAACCAACCTAAAGGAGAGCAAATCTTCAATA
AATCTCGTCCTCCTTTTAGAAGGGGTGGGAGGTTTGAGAA
GCCTGGTCCACCCAACATGATGAACAGACGCCCCAGATGG
TTCGGACCACCTGATGAGATGGAGATGATGAAGAAAGGGC
GTCCCATGCCTAACAAAGGTGGCAATATTGAAATCCTGCC
ATTTG

Related Transcripts

Transcripts related to sltm

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sltm-204 (1) Ensembl	Ensembl	595 nt	Select Tool ZFIN BLAST
mRNA	sltm-203 (1) Ensembl	Ensembl	805 nt	Select Tool ZFIN BLAST
mRNA	sltm-205 (1) Ensembl	Ensembl	449 nt	Select Tool ZFIN BLAST
mRNA	sltm-207 (1) Ensembl	Ensembl	9,342 nt	Select Tool ZFIN BLAST
mRNA	sltm-209 (1) Ensembl	Ensembl	2,002 nt	Select Tool ZFIN BLAST
ncRNA	sltm-004 (1) Ensembl	Ensembl	445 nt	Select Tool ZFIN BLAST
ncRNA	sltm-005	Ensembl	1,290 nt
ncRNA	sltm-007 (1) Ensembl	Ensembl	740 nt	Select Tool ZFIN BLAST
ncRNA	sltm-008 (1) Ensembl	Ensembl	680 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations