Transcript

sltm-204

ID

ZDB-TSCRIPT-090929-10786

Name

sltm-204 Nomenclature History

Previous Names

sltm-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

sltm (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142480 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000142480.3|gene_biotype:protein_coding|ENSDARG00000052728.9 transcript_biotype:nonsense_mediated_decay gene_symbol:sltm cdna chromosome:GRCz11:7:30545172:30560439:-1
TAGTTGGAGTGTGTCGCTGTCGAGCTCTTCGCCTCGCACA
CAGATTTAGTTACACAGGTAAAATGGCGTCGGGGGCCATT
TCAGCGGAGACTAAGAAGATTACAGATTTACGTGTTGTGG
ACCTCAAATCAGAGCTCAAACGAAGAAATTTGGATGTGAG
CGGGGTGAAAAACACACTGATCGCAAGACTGAAGCAGGCC
ATAGAAGATGAAGGTGGTGATCCAGACAACATTGAGATCA
CCATGTCAGCTGACACACCCACCAGAAAATACGGCAAGTC
TAAAGGAAAAAAGACAGAGCTGGACACTGATACCACCATG
GAGGAGGAGTCCTTCTCTAAGGAGACCGAGGAAGAGGAAT
CTGAAAAAGCTCTTCAAAAGACAGAGATGGAAAGGCTGCG
AAAGATGAAAAAGGAAGTGGCAGCAGCAGTACCAGCTCTA
CTCGCAATCTGTGGGTGAGTGGCCTATCATCCAACACCAA
AGCAGCTGATCTCAAGAACCTCTTTGGCAAATATGGAAAG
GTTTTTAGTGCCAAAGTGGTCACCAATGCTCGTAGCCCAG
GAGCTAAATGTTATGGATTAGTTACCATGTCGTCC

OTTDART00000028279 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000028279|OTTDARG00000022050|ZDB-GENE-040426-2647 sltm|no_translation sltm-002 LG_ AL935053.6 Danio rerio protein_coding KNOWN, 595 bp
TAGTTGGAGTGTGTCGCTGTCGAGCTCTTCGCCTCGCACA
CAGATTTAGTTACACAGGTAAAATGGCGTCGGGGGCCATT
TCAGCGGAGACTAAGAAGATTACAGATTTACGTGTTGTGG
ACCTCAAATCAGAGCTCAAACGAAGAAATTTGGATGTGAG
CGGGGTGAAAAACACACTGATCGCAAGACTGAAGCAGGCC
ATAGAAGATGAAGGTGGTGATCCAGACAACATTGAGATCA
CCATGTCAGCTGACACACCCACCAGAAAATACGGCAAGTC
TAAAGGAAAAAAGACAGAGCTGGACACTGATACCACCATG
GAGGAGGAGTCCTTCTCTAAGGAGACCGAGGAAGAGGAAT
CTGAAAAAGCTCTTCAAAAGACAGAGATGGAAAGGCTGCG
AAAGATGAAAAAGGAAGTGGCAGCAGCAGTACCAGCTCTA
CTCGCAATCTGTGGGTGAGTGGCCTATCATCCAACACCAA
AGCAGCTGATCTCAAGAACCTCTTTGGCAAATATGGAAAG
GTTTTTAGTGCCAAAGTGGTCACCAATGCTCGTAGCCCAG
GAGCTAAATGTTATGGATTAGTTACCATGTCGTCC

Related Transcripts

Transcripts related to sltm

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sltm-204	Ensembl	595 nt
mRNA	sltm-203 (1) Ensembl	Ensembl	805 nt	Select Tool
mRNA	sltm-205 (1) Ensembl	Ensembl	449 nt	Select Tool
mRNA	sltm-207 (1) Ensembl	Ensembl	9,342 nt	Select Tool
mRNA	sltm-209 (1) Ensembl	Ensembl	2,002 nt	Select Tool ZFIN BLAST
ncRNA	sltm-004 (1) Ensembl	Ensembl	445 nt	Select Tool
ncRNA	sltm-005 (1) Ensembl	Ensembl	1,290 nt	Select Tool
ncRNA	sltm-007 (1) Ensembl	Ensembl	740 nt	Select Tool
ncRNA	sltm-008 (1) Ensembl	Ensembl	680 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations