FIGURE

Figure 4—figure supplement 2.

ID

ZDB-FIG-210327-102

Publication

Uriu et al., 2021 - From local resynchronization to global pattern recovery in the zebrafish segmentation clock

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Figure 4—figure supplement 2.

Change in advection pattern increases the time to PLD for earlier DAPT washout.

(A) Change in advection pattern at t = t_g. The blue and red lines indicate the advection speed v_d and strain rate, respectively. x-=x-xa where xa is the position of the anterior end of the PSM. (B), (C) Kymographs of vorticity for washout at (B) t_wash-out = 0 min (0 somite stage; ss) and (C) 270 min (9 ss). White dotted lines indicate t_g at which the advection pattern changes (t_g = 9 ss). Vorticity across the right PSM is shown. Trajectories of clockwise vortices for t_wash-out = 0 min and those of counter-clockwise vortices for t_wash-out = 270 min are presented. (D-G) Dependence of times to FRS (blue) and PLD (green) on washout time t_wash-out with change in advection pattern at (D) t_g = 6 ss, (E) 9 ss, (F) 12 ss, and (G) 15 ss. The gray dotted lines indicate times to FRS and PLD for the constant tissue shown in Figure 4A in the main text. The box-whisker plot indicates (0.05, 0.25, 0.75, 0.95) quantiles of times to FRS and PLD for 100 realizations of simulations. The white bars indicate median.

Expression Data

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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