ZFIN ID: ZDB-GENE-980526-561

Gene Name:myogenic differentiation 1
Gene Symbol: myod1

Previous Names: MyoD(1) , etID309723.25(1) , zgc:136744, wu:fb57a01, MyoD1(1) , myod
Nomenclature History

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GENE EXPRESSION:(current status)

All expression data:	362 figure(s) from 272 publications
Wild Type Stages, Structures:	Gastrula:Shield (6.00h-8.00h) to Larval:Days 7-13 (168.00h-14d, 4.5mm, 8 teeth)
	adaxial cell, adductor hyohyoid ... (all 40)
Curated microarray expression:	GEO  (1)

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MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   7 genotypes
Allele(s):   b349, fh261, hu2023, hu2024, unrec_myod1

Phenotype: (current status)

Data:	5 figures from 3 publications
Observed in:	cephalic musculature, skeletal muscle fiber development

Knockdown reagents: MO1-myod1 (1) ,   MO2-myod1 (1) ,   MO3-myod1 (1) ,   MO4-myod1 (1) ,   MO5-myod1 (1) ,   MO6-myod1 (1) ,   MO7-myod1 (1) ,   MO8-myod1 (1)

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GENE PRODUCTS:

Gene Ontology

Ontology	Qualifier	GO Term
Biological Process		muscle organ development (more)
Cellular Component		nucleoplasm (more)
Molecular Function		DNA binding (more)

All GO Terms (15)

Protein Families, Domains and Sites:

InterPro:IPR001092 (1) InterPro:IPR002546 (1) InterPro:IPR011598 (1) InterPro:IPR022032 (1)

PROSITE:PS50888 (1)

Pfam:PF00010 (1) Pfam:PF01586 (1) Pfam:PF12232 (1)

Gene Product Description

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ANTIBODIES:

Ab1-myod (6)

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CONSTRUCTS WITH SEQUENCE FROM myod1:

Tg(HsMYOD1-myod1:EGFP)

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SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

myod1 Contained in	[BAC] CH211-201M7 (1)    (order this)
myod1 Encodes	[EST] fb57a01 [cDNA] MGC:136744 (1)    (order this)

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SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_131262 (1)	1762 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX004812 (1)	189554 bp	- Select Tool - MegaBLAST Ensembl
Polypeptide	UniProtKB:Q90477 (1)	275 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:36017 (1)
All Sequence Information (11)

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OTHER  myod1  GENE / MARKER PAGES:

Entrez Gene:30513 (1)

VEGA:OTTDARG00000021238 (1)

Ensembl(Zv8):ENSDARG00000030110 (1)

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MAPPING INFORMATION:

LG:  25  Details

View Map: Merged  Individual Panels

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ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	myod1	25
Human	MYOD1	11 (p15.4)	OMIM:159970 Entrez Gene:4654
Mouse	Myod1	7 (23.50 cM)	MGI:97275 Entrez Gene:17927
Orthology Details

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CITATIONS   (420)