Research
General Information
ZIRC
ZFIN: Gene: myod1
ZFIN ID: ZDB-GENE-980526-561

Gene Name:myogenic differentiation 1
Gene Symbol: myod1
Previous Names: MyoD(1) , etID309723.25(1) , zgc:136744, wu:fb57a01, MyoD1(1) , myod
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 343 figure(s) from 260 publications
Wild Type Stages, Structures: Gastrula:Shield (6.00h-8.00h) to Larval:Days 7-13 (168.00h-14d, 4.5mm, 8 teeth)
  adaxial cell, adductor hyohyoid ... (all 40)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Mutant line(s):   5 genotypes
Allele(s):   T(LG25:foxb1.2,isl2,myod)b349, fh261, hu2023, hu2024, unrec_myod1
Phenotype: (current status)
  Data: 5 figures from 3 publications
  Observed in: cephalic musculature, skeletal muscle fiber development
Knockdown reagents: MO1-myod1 (1) ,   MO2-myod1 (1) ,   MO3-myod1 (1) ,   MO4-myod1 (1) ,   MO5-myod1 (1) ,   MO6-myod1 (1) ,   MO7-myod1 (1) ,   MO8-myod1 (1)

GENE PRODUCTS:

Gene Ontology
Ontology Qualifier GO Term
Molecular Function DNA binding (more)
Biological Process muscle organ development (more)
Cellular Component NOT nucleoplasm (more)
All GO Terms (15)

Protein Families, Domains and Sites:
  • InterPro:IPR001092 (1)
  • InterPro:IPR002546 (1)
  • InterPro:IPR011598 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF01586 (1)
  • Loading Transcript Data...

    Gene Product Description


    ANTIBODIES:
    Ab-myod (4)


    CONSTRUCTS WITH SEQUENCE FROM myod1:
    Tg(HsMYOD1-myod1:EGFP)

    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    myod1 Contained in [BAC] CH211-201M7 (1)    (order this)
    myod1 Encodes [EST] fb57a01
    [cDNA] MGC:136744 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131262 (1) 1762 bp
    Genomic GenBank:BX004812 (1) 189554 bp
    Polypeptide UniProtKB:Q90477 (1) 275 aa
    Sequence Clusters UniGene:36017 (1)
    All Sequence Information (13)

    OTHER  myod1  GENE / MARKER PAGES:

  • Entrez Gene:30513 (1)
  • VEGA:OTTDARG00000021238 (1)
  • Ensembl(Zv8):ENSDARG00000030110 (1)

  • MAPPING INFORMATION:
      LG:  25  Details   View Map: Merged  Individual Panels

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish myod1  25
    Human MYOD1  11 (p15.4)
  • OMIM:159970
  • Entrez Gene:4654
  • Mouse Myod1  7 (23.50 cM)
  • MGI:97275
  • Entrez Gene:17927
  • Orthology Details

    CITATIONS   (349)