ZFIN ID: ZDB-GENE-980526-561
Gene Name: myogenic differentiation 1
Gene Symbol: myod1
Sequence Ontology ID : SO:0000704

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Previous Names: MyoD1 (1), MyoD (1), myod, etID309723.25 (1), wu:fb57a01, zgc:136744

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 606 figures from 459 publications
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Adult (90d-730d, breeding adult)
  adaxial cell, adaxial cell nucleus, adductor hyohyoid, adductor mandibulae (all 93) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh261 Point Mutation Unknown Premature Stop ENU
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • hu2023 Point Mutation Unknown Premature Stop ENU
    hu2024 Point Mutation Unknown Premature Stop ENU
    myod1_unrecovered Point Mutation Unknown Unknown ENU
    Targeting reagents: MO1-myod1 (1), MO2-myod1 (1), MO3-myod1 (1), MO4-myod1 (1), MO5-myod1 (1) (all 9) expand
    PHENOTYPE
    Data: 10 figures from 7 publications
    Observed in: cephalic musculature, esophagus skeletal muscle cell, fast muscle cell, head (all 8) expand
    DISEASE ASSOCIATED WITH myod1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process muscle organ development (more)
    Cellular Component NOT nucleoplasm (more)
    Molecular Function protein binding (more)
    GO Terms (all 28)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002546 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR022032 (1)
  • InterPro:IPR036638 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF01586 (1)
  • Pfam:PF12232 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA myod1-001 (1) 1772
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-myod1 (1), Ab2-myod1 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM myod1
    Tg(Hsa.MYOD1-myod1:EGFP), TgBAC(myod1:EGFP)
    MARKER RELATIONSHIPS
    myod1Contained in: [BAC] CH211-201M7 (1) (order this)
    myod1Encodes: [EST] fb57a01
    [cDNA] MGC:136744 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131262 (1) 1762bp
    Genomic GenBank:BX004812 (1) 189554bp
    Select Tool
    Polypeptide UniProtKB:Q90477 (1) 275aa
    Sequence Clusters UniGene:36017 (1)
    Sequence Information (all 17)
    OTHER myod1 GENE PAGES
  • Alliance (1)
  • Gene:30513 (1)
  • VEGA:OTTDARG00000021238 (1)
  • Ensembl(GRCz10):ENSDARG00000030110 (1)
  • ORTHOLOGY for myod1 (Chr: 25)
    CITATIONS (814)