Gene

srrm1

ID
ZDB-GENE-040426-2789
Name
serine/arginine repetitive matrix 1
Symbol
srrm1 Nomenclature History
Previous Names
  • wu:fb34f04
  • wu:fb38b06
  • zgc:63802
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to be involved in mRNA processing. Orthologous to human SRRM1 (serine and arginine repetitive matrix 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srrm1 Human Ortholog
No data available
Associated With srrm1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002483 PWI domain
Family IPR052225 Serine/arginine repetitive matrix
Homologous_superfamily IPR036483 PWI domain superfamily
Domain Details Per Protein
Protein Length PWI domain PWI domain superfamily Serine/arginine repetitive matrix
UniProtKB:Q6PEG8 896
UniProtKB:A0A8M2B4V6 846
UniProtKB:E7F1X7 929
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript srrm1-203 (1) Ensembl 889 nt
aberrant processed transcript srrm1-205 (1) Ensembl 803 nt
mRNA srrm1-201 (1) Ensembl 3,480 nt
mRNA srrm1-204 (1) Ensembl 3,517 nt
mRNA srrm1-208 (1) Ensembl 848 nt
ncRNA ottdart00000055512 (1) Ensembl 567 nt
ncRNA ottdart00000055514 (1) Ensembl 612 nt
ncRNA ottdart00000055516 (1) Ensembl 834 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations