Transcript

srrm1-201

ID

ZDB-TSCRIPT-141209-1702

Name

srrm1-201

Previous Names

srrm1-008

Transcript Type

mRNA

Annotation Status

Annotation Method

Havana

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000055518 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055518|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|OTTDARP00000043543 srrm1-008 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 3480 bp
ATGGACGCGGGTTTTTTCCGCGGCACCAGTGCGGAGCAGG
ATAACCGCTTCAGCAACAAACACAAGAAACTCTTGAAGCA
GCTGAAGTTTGCAGAATGTCTGGAGAAAAAGGTGGATATG
ACCAAGGTCAACCTGGAAGTCATCAAGCCCTGGATCACCC
AGCGTGTGACAGAGATACTTGGCTTCGAGGATGATGTGGT
CATTGAATTTGTCTTTAACCAGCTGGAGGAAAAGAATCCA
GATGGAAAGATGATGCAGATTAATTTGACAGGTTTTCTGA
ATGGAAAGAATGCTCGGGAGTTCATGAAAGACCTCTGGCC
ACTGTTGTTAAGCGCCCAGGAGAACATTGCCGGTATCCCA
TCAGCCTTCCTGGAGCAGAAGAAAGAGGAGATCAAACAGA
GACAGATTGAACAGGAGAAACTCGCCTCTCTAAAAAAAGT
AGATGAAGATAAAAGGGAGAAGGAGAACAAAGAAAGAGCT
CAGTCAAAAAGCCCTAAACGGAGAAAGTCTCGCTCCCCTG
TGAAGCGTGATCGTAAATCCAGTCCTTCTCGTTCTCGCTC
TCCTCGACGAAAAATAAGCCCAGCCGCTTCACCACCTTCC
AGTCCACCCAATCATAAAGAAGAACCGAAGCGAGAACCAG
ACCAGTCAGAGAGCTCTAAACCAGAGCCACTCATTCAGGA
AGCTTCATCTACCAGTGATCTTGTGACTGAGATGAAGCCG
GACTCAGTGTCAGAGCCTGTGAAAGAGTCCTCTCCAGACA
AAACGTCAAAATCAGAGGACCGGCCTAAACCCAGGGACAG
GGAGAAGGATGGGCGCAAAGATCGTCCACGCCACCGCTCT
CGTTCTCGATCACCTCGCTCACGCAGACGACCTCGATCCC
GCTCTAGGTCATTCTCTCCTCGCCGGAGAACAAGTCCCAG
GAGGCGAATCTCTCCGAGACGGAGGAGTCCTCCTAGACGC
CAGCCTCCCTCTAGACATAGACGTAGCCGCTCACCTGTTC
GCAGGCGGCGGTCTCGCTCCCGCTCCTCCTCAGGCAGCTC
CTCCTCTCGGTCGCCCCACAAGAGAGCAGGAAAACGAGGG
TCAGCGACCCCACCCAGAAAACTTGCACGTCGCACGGACC
TCTCCAGCCCCCCAAGAAGACGAGGCCGCAGTCCTTCAGG
ACCAGACACCAGCCCTTCAGCTGGGAAGCACAGGCCTGGT
GGAAGAAATGACTCTCGCTCTCCCTCTCCAAAACCCAGGC
GATCTGATGCATCAGATTCAGAGGAGGATAAGTTGGGCAA
AGGGTCAACAGCAGATTCTGTCCAGCAGCGACGTCAGTAT
CGCAGACAGAATCAGCAATCCTCTTCAGACACAGGTTCAT
CCTCTTCATCTGAAGATGAAGGTCCAAGGAGGCAGAATAG
AGGTGCAGGTGCCAGGAATGGAGAAATCAGGAGGAGACGG
AGTCATTCACCTGCCTCACCACGGAGGCGGCACAGAGATG
CATCCCCAAGAAAAAGACGTTCTCCGTCACCTCCTGGACG
TAGACATCGTTCACAATCTCCTGTTCGCCGCCGCAGGTCA
CCCTCTCCTCCCCCAAGACGCAGGTCTCCATCTCCACCTC
CCCGGCGATTTACTCCCCCAATTCAGCGTCGATACAGTCC
CCCCTCCCCTTCTCCAGCCCAAAAGAGACGGTCATCAGGG
TCTCCCCCCAAACGAAGAAGGTCTCCTTCACCCATGCCCA
AGCGTAGAATACCTCCTTCACCTCCCCCCAAACGCAGAAT
GTCTCCATCACCTCCCCCCAAACGCAGAAAGTCTCCATCA
CCGATGTCAAAACGCAGAACATCTCCATCGGTGTCAAAAC
GTAGAACATCGCCTTCCCCTGTGGCTAAACACAGAAGGTC
TCCATCACCCATGTCTAAACGTAGAACATGTGCTTCACCT
GTGTCTAAACGCAGAAATTCTCCCTCACCTGCCCCGCAAC
GTAGAAGTTCTCCTTCTCCCATGCCCAAGCATAGAGGGTC
ACCTTCCCCTGTGACTAAACGTCACACCTCTCGATCCCCC
AAAAGGAGTCGTGGCACCAGTCCAGGAAAAAGACGTACTC
CACCCTCTTCTGCTTCACCTCCTCCTCGTCACCGCCGAAA
CTCTCCAAATCCCCCTGCAGCCCAACGGGGCAGAGACACC
CGGTCCTCTCCCCCTGCCCACACTACCCGAGTGTCTTCCA
GTCCTCCAGGTAGATATGGAGCCTCTGGTTCCTCCCCGCA
GAGACAAAGACGGCAGACATCCCCATCACACAGCACCAGA
CCCATTCGCAGGGTTTCCCGCACTCCAGAACCGCGCAAAT
CGCAGAGAGGTTCTCAGAGTCCTCCGCCAGAAAGGAGGCA
GGTTTCACGTTCACCATCTGCTTCTCCTCCTCCGGCTCAG
AAGCGGCCTGCTTCAGTCTCACCCTCTCGCTCCACTAGCC
GTTCTCCACCTCCACCAGCCAAAAAGAACAGCAGTGTCTC
CCCGAGCCCTTCACCTAACAAGAACTCTGATGCAGAAGGT
GGTAAGAAGAAGAAAAAGAAGAAAGAAAAGAAACACAAGA
AAGATAAGAAACACAAGAAGCATAAGAAACAGAAAAAGGA
GAAGGGTGGAGAAGAAAAGAGTGGTGGGGCAACAGGAGGA
CATGGACCGGAAGCAGAGCCAGACTCTGACCAGAAAAAGG
AATCAGAGAGTGAAGTAGAAGACAGTTTGGATGATCTGGA
GAAGCACCTACGTGAGAAAGCTCTCCGCTCAATGAGGAAG
GCCCAGATGTCTCCATCGTCTCAGTCCTGAGGGCATCTCT
CCTGCACCCCACATTTCCCTTTTTCTCTTCCACTCTCTGC
ATTTTAAATGTTTGATGTTGGTTCAGCTTTAGAATGTACA
AATTGTTAAAATTCACCCTAGACTTTTTTTTTCATTTGTT
TTGGAATTGTTTTTTTATTTTTATTTTGGCATGTTTATTG
CTGAAGTGTTTTATGATATAGAAATGAGTGAGCAGCTGAA
GTTTCTCCATCAGATTTTGACCCTTACCACTTAAATACTG
TCAAGAAGAAATGTTCCAAACAAAACTTTTTTTAGTCCCC
ACACCCCTCACCTCCTGTGTTGCTTTTACAGTCATGATGA
AAAAAAAATGAAAAGCTTATTTGCCGTTCTGAGTTAATAA
TGTACGAGTTAGCCTATAGATTCTCTCTTAACCTTCGCGG
GACTTTTTACGAGAGTTTTGTTTGCATGGACGGCAGACCC
CAGCGTGTTTGTCCTCTTGTGTGCATGATCCATAAAGTAA
AACTGCTCTCTCTGTTCATCTGAGCATTGTGGCAGTGCTT
GAGAGCTCCACTGTACACATGAGAACAAATCCGAAGTCTG
TTTTCATCTCTCTCTTTTTTTTTTGTTGCTTATTTTTTGT
AACCTAAGTTGTGTTTGACATTGTTGGACCCTGCAGAAAT
GTCTGACTTTGAAGAAAGTCACATTAAATTGAAAGAAAAA

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Havana	889 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	srrm1-205 (1) Ensembl	Havana	803 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-201	Havana	3480 nt
mRNA	srrm1-204 (1) Ensembl	Havana	3517 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-208 (1) Ensembl	Havana	848 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055512 (1) Ensembl	Havana	567 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055514 (1) Ensembl	Havana	612 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055516 (1) Ensembl	Havana	834 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations