Transcript

srrm1-204

ID

ZDB-TSCRIPT-141209-476

Name

srrm1-204

Previous Names

ottdart00000055511

Transcript Type

mRNA

Annotation Status

Annotation Method

Havana

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000055511 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055511|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|OTTDARP00000043539 srrm1-001 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 3517 bp
GCAGTGGATTGTGGGACATCGTGCCATATTGACACACGAC
AGAAATGGACGCGGGTTTTTTCCGCGGCACCAGTGCGGAG
CAGGATAACCGCTTCAGCAACAAACACAAGAAACTCTTGA
AGCAGCTGAAGTTTGCAGAATGTCTGGAGAAAAAGGTGGA
TATGACCAAGGTCAACCTGGAAGTCATCAAGCCCTGGATC
ACCCAGCGTGTGACAGAGATACTTGGCTTCGAGGATGATG
TGGTCATTGAATTTGTCTTTAACCAGCTGGAGGAAAAGAA
TCCAGATGGAAAGATGATGCAGATTAATTTGACAGGTTTT
CTGAATGGAAAGAATGCTCGGGAGTTCATGAAAGACCTCT
GGCCACTGTTGTTAAGCGCCCAGGAGAACATTGCCGGTAT
CCCATCAGCCTTCCTGGAGCAGAAGAAAGAGGAGATCAAA
CAGAGACAGATTGAACAGGAGAAACTCGCCTCTCTAAAAA
AAGTAGATGAAGATAAAAGGGAGAAGGAGAACAAAGAAAG
AGCTCAGTCAAAAAGCCCTAAACGGAGAAAGTCTCGCTCC
CCTGTGAAGCGTGATCGTAAATCCAGTCCTTCTCGTTCTC
GCTCTCCTCGACGAAAAATAAGCCCAGCCGCTTCACCACC
TTCCAGTCCACCCAATCATAAAGAAGAACCGAAGCGAGAA
CCAGACCAGTCAGAGAGCTCTAAACCAGAGCCACTCATTC
AGGAAGCTTCATCTACCAGTGATCTTGTGACTGAGATGAA
GCCGGACTCAGTGTCAGAGCCTGTGAAAGAGTCCTCTCCA
GACAAAACGTCAAAATCAGAGGACCGGCCTAAACCCAGGG
ACAGGGAGAAGGATGGGCGCAAAGATCGTCCACGCCACCG
CTCTCGTTCTCGATCACCTCGCTCACGCAGACGACCTCGA
TCCCGCTCTAGGTCATTCTCTCCTCGCCGGAGAACAAGTC
CCAGGAGGCGAATCTCTCCGAGACGGAGGAGTCCTCCTAG
ACGCCAGCCTCCCTCTAGACATAGACGTAGCCGCTCACCT
GTTCGCAGGCGGCGGTCTCGCTCCCGCTCCTCCTCAGGCA
GCTCCTCCTCTCGGTCGCCCCACAAGAGAGCAGGAAAACG
AGGGTCAGCGACCCCACCCAGAAAACTTGCACGTCGCACG
GACCTCTCCAGCCCCCCAAGAAGACGAGGCCGCAGTCCTT
CAGGACCAGACACCAGCCCTTCAGCTGGGAAGCACAGGCC
TGGTGGAAGAAATGACTCTCGCTCTCCCTCTCCAAAACCC
AGGCGATCTGATGCATCAGATTCAGAGGAGGATAAGTTGG
GCAAAGGGTCAACAGCAGATTCTGTCCAGCAGCGACGTCA
GTATCGCAGACAGAATCAGCAATCCTCTTCAGACACAGGT
TCATCCTCTTCATCTGAAGATGAAGGTCCAAGGAGGCAGA
ATAGAGGTGCAGGTGCCAGGAATGGAGAAATCAGGAGGAG
ACGGAGTCATTCACCTGCCTCACCACGGAGGCGGCACAGA
GATGCATCCCCAAGAAAAAGACGTTCTCCGTCACCTCCTG
GACGTAGACATCGTTCACAATCTCCTGTTCGCCGCCGCAG
GTCACCCTCTCCTCCCCCAAGACGCAGGTCTCCATCTCCA
CCTCCCCGGCGATTTACTCCCCCAATTCAGCGTCGATACA
GTCCCCCCTCCCCTTCTCCAGCCCAAAAGAGACGGTCATC
AGGGTCTCCCCCCAAACGAAGAAGGTCTCCTTCACCCATG
CCCAAGCGTAGAATACCTCCTTCACCTCCCCCCAAACGCA
GAATGTCTCCATCACCTCCCCCCAAACGCAGAAAGTCTCC
ATCACCGATGTCAAAACGCAGAACATCTCCATCGGTGTCA
AAACGTAGAACATCGCCTTCCCCTGTGGCTAAACACAGAA
GGTCTCCATCACCCATGTCTAAACGTAGAACATGTGCTTC
ACCTGTGTCTAAACGCAGAAATTCTCCCTCACCTGCCCCG
CAACGTAGAAGTTCTCCTTCTCCCATGCCCAAGCATAGAG
GGTCACCTTCCCCTGTGACTAAACGTCACACCTCTCGATC
CCCCAAAAGGAGTCGTGGCACCAGTCCAGGAAAAAGACGT
ACTCCACCCTCTTCTGCTTCACCTCCTCCTCGTCACCGCC
GAAACTCTCCAAATCCCCCTGCAGCCCAACGGGGCAGAGA
CACCCGGTCCTCTCCCCCTGCCCACACTACCCGAGTGTCT
TCCAGTCCTCCAGGTAGATATGGAGCCTCTGGTTCCTCCC
CGCAGAGACAAAGACGGCAGACATCCCCATCACACAGCAC
CAGACCCATTCGCAGGGTTTCCCGCACTCCAGAACCGCGC
AAATCGCAGAGAGGTTCTCAGAGTCCTCCGCCAGAAAGGA
GGCAGGTTTCACGTTCACCATCTGCTTCTCCTCCTCCGGC
TCAGAAGCGGCCTGCTTCAGTCTCACCCTCTCGCTCCACT
AGCCGTTCTCCACCTCCACCAGCCAAAAAGAACAGCAGTG
TCTCCCCGAGCCCTTCACCTAACAAGAACTCTGATGCAGA
AGGTGGTAAGAAGAAGAAAAAGAAGAAAGAAAAGAAACAC
AAGAAAGATAAGAAACACAAGAAGCATAAGAAACAGAAAA
AGGAGAAGGGTGGAGAAGAAAAGAGTGGTGGGGCAACAGG
AGGACATGGACCGGAAGCAGAGCCAGACTCTGACCAGAAA
AAGAGAGTGAAGTAGAAGACAGTTTGGATGATCTGGAGAA
GCACCTACGTGAGAAAGCTCTCCGCTCAATGAGGAAGGCC
CAGATGTCTCCATCGTCTCAGTCCTGAGGGCATCTCTCCT
GCACCCCACATTTCCCTTTTTCTCTTCCACTCTCTGCATT
TTAAATGTTTGATGTTGGTTCAGCTTTAGAATGTACAAAT
TGTTAAAATTCACCCTAGACTTTTTTTTTCATTTGTTTTG
GAATTGTTTTTTTATTTTTATTTTGGCATGTTTATTGCTG
AAGTGTTTTATGATATAGAAATGAGTGAGCAGCTGAAGTT
TCTCCATCAGATTTTGACCCTTACCACTTAAATACTGTCA
AGAAGAAATGTTCCAAACAAAACTTTTTTTAGTCCCCACA
CCCCTCACCTCCTGTGTTGCTTTTACAGTCATGATGAAAA
AAAAATGAAAAGCTTATTTGCCGTTCTGAGTTAATAATGT
ACGAGTTAGCCTATAGATTCTCTCTTAACCTTCGCGGGAC
TTTTTACGAGAGTTTTGTTTGCATGGACGGCAGACCCCAG
CGTGTTTGTCCTCTTGTGTGCATGATCCATAAAGTAAAAC
TGCTCTCTCTGTTCATCTGAGCATTGTGGCAGTGCTTGAG
AGCTCCACTGTACACATGAGAACAAATCCGAAGTCTGTTT
TCATCTCTCTCTTTTTTTTTTGTTGCTTATTTTTTGTAAC
CTAAGTTGTGTTTGACATTGTTGGACCCTGCAGAAATGTC
TGACTTTGAAGAAAGTCACATTAAATTGAAAGAAAAA

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Havana	889 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	srrm1-205 (1) Ensembl	Havana	803 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-201 (1) Ensembl	Havana	3480 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-204	Havana	3517 nt
mRNA	srrm1-208 (1) Ensembl	Havana	848 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055512 (1) Ensembl	Havana	567 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055514 (1) Ensembl	Havana	612 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055516 (1) Ensembl	Havana	834 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations