Transcript

ottdart00000055514

ID

ZDB-TSCRIPT-141209-477

Name

ottdart00000055514

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Havana

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000055514 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055514|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|no_translation srrm1-004 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 612 bp
ATATTGACACACGACAGAAATGGACGCGGGTTTTTTCCGC
GGCACCAGTGCGGAGCAGGATAACCGCTTCAGCAACAAAC
ACAAGAAACTCTTGAAGCAGCTGAAGTTTGCAGAATGTCT
GGAGAAAAAGGTGGATATGACCAAGGTCAACCTGGAAGTC
ATCAAGCCCTGGATCACCCAGCGTGTGACAGAGATACTTG
GCTTCGAGGATGATGTGGTCATTGAATTTGTCTTTAACCA
GCTGGAGGAAAAGGCCTGAACCAATATGGATCTTATTCCT
TGCATCTGAAGTATAGCACCAACTCCTAATTAGATCTCAA
CTGAGCCCAAAGTCTCTCTGAATCCAACTCTCCCTTGATG
ATGAGCTTTATTTTTTGAGGTGAGTTATGAGCAGGGCTTG
ACATTGTGCCAGTGGTAGAGTCATTTCAGCTTGATCATTT
GTGCCTTTCTGTTTTAGTCAAAGTTTAGCAGTACATCTTA
AACATAAAGGCCTGATTTATCACTTTTATGGAAATGAAAA
CTATTAAGGAATAAAATGAAAAGATGATTTTGCATGTAGG
ATGATAATGCAGTACAACATTGGAAGTGTAAGAGACTTTT
TTTATTTATTTA

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Havana	889 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	srrm1-205 (1) Ensembl	Havana	803 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-201 (1) Ensembl	Havana	3480 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-204 (1) Ensembl	Havana	3517 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-208 (1) Ensembl	Havana	848 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055512 (1) Ensembl	Havana	567 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055514	Havana	612 nt
ncRNA	ottdart00000055516 (1) Ensembl	Havana	834 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations