Transcript

ottdart00000055516

ID

ZDB-TSCRIPT-141209-2922

Name

ottdart00000055516

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Havana

Associated With Genes

srrm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000055516 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055516|OTTDARG00000038724|ZDB-GENE-040426-2789 srrm1|no_translation srrm1-006 LG_ CU972452.10 Danio rerio protein_coding KNOWN, 834 bp
TGCATGCTCAGAGGGAGTTTATACACTTTAGAAGTGTCCT
TGATTTTAACTTTTTTCATTCAATTGGTTTAAAAGTAAAA
AAGAAAATAAAATAAATGCATAACATTCTGTTGTGGCTGT
TGGTTATAGAAACCATTTTGAGGCCCGCAGGTACTGGGCT
CTTGTTGAAAAGCAGCTGTTTACTGATGTTCAGGAAAGGA
AGGTCTAGGTAGACTATCAGAATTCTGTGCTCTTGTTCGG
TGTCAGTATTAACTGCTTGGTTTTCTCCCCTTCTCTCTTC
CTCCCCTGCTGTTTGTGTTGCAGAATCCAGATGGAAAGAT
GATGCAGATTAATTTGACAGGTTTTCTGAATGGAAAGAAT
GCTCGGGAGTTCATGAAAGACCTCTGGCCACTGTTGTTAA
GCGCCCAGGAGAACATTGCCGGTATCCCATCAGCCTTCCT
GGAGCAGAAGAAAGAGGAGATCAAACAGAGACAGATTGAA
CAGGAGAAACTCGCCTCTCTAAAAAAAGTAGATGAAGATA
AAAGGGAGAAGGAGAACAAAGAAAGAGCTCAGTCAAAAAG
CCCTAAACGGAGAAAGTCTCGCTCCCCTGTGAAGCGTGAT
CGTAAATCCAGTCCTTCTCGTTCTCGCTCTCCTCGACGAA
AAATAAGCCCAGCCGCTTCACCACCTTCCAGTCCACCCAA
TCATAAAGAAGAACCGAAGCGAGAACCAGACCAGTCAGAG
AGCTCTAAACCAGAGCCACTCATTCAGGAAGCTTCATCTA
CCAGTGATCTTGTGACTGAGATGAAGCCGGACTCAGTGTC
AGAGCCTGTGAAAGAGTCCTCTCCAGACAAAACG

Related Transcripts

Transcripts related to srrm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srrm1-203 (1) Ensembl	Havana	889 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	srrm1-205 (1) Ensembl	Havana	803 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-201 (1) Ensembl	Havana	3480 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-204 (1) Ensembl	Havana	3517 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	srrm1-208 (1) Ensembl	Havana	848 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055512 (1) Ensembl	Havana	567 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055514 (1) Ensembl	Havana	612 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000055516	Havana	834 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations