ZFIN ID: ZDB-GENE-030115-1
Gene Name: glyceraldehyde-3-phosphate dehydrogenase
Gene Symbol: gapdh
Previous Names: gapd (1), bb02e05, cb609 (1), mg:bb02e05, wu:fb33a10, wu:ft80f05
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 33 figures from 21 publications
Directly Submitted Expression Data: 6 figures (28 images) from Thisse et al., 2001 [cb609]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  brain, eye, gill, gut (all 24) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa42694 Point Mutation Unknown Unknown ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH gapdh HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process microtubule cytoskeleton organization (more)
Cellular Component cytosol (more)
Molecular Function glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006424 (1)
  • InterPro:IPR016040 (1)
  • InterPro:IPR020828 (1)
  • InterPro:IPR020829 (1)
  • InterPro:IPR020830 (1)
  • InterPro:IPR020831 (1)
  • PROSITE:PS00071 (1)
  • Pfam:PF00044 (1)
  • Pfam:PF02800 (1)
  • EC:1.2.1.12 (1)
  • EC:2.6.99.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gapdh-001 (1) 1331
    gapdh-002 (1) 902
    gapdh-003 (1) 445
    gapdh-004 (1) 825
    ncRNA gapdh-005 (1) 834
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIES
    Ab1-gapdh (1), Ab6-gapdh (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gapdh No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    gapdhContained in: [BAC] DKEY-260G12 (1) (order this)
    gapdhEncodes: [EST] bb02e05, cb609 (1) (order this), fb33a10 (1), ft80f05
    [cDNA] MGC:86789 (1) (order this), MGC:110724 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115114 (1) 1329bp
    Genomic GenBank:CU861451 (1) 120950bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IGI1 (1) 336aa
    Sequence Clusters UniGene:35640 (1)
    Sequence Information (all 26)
    OTHER gapdh GENE PAGES
  • Gene:317743 (1)
  • VEGA:OTTDARG00000032973 (1)
  • Ensembl(GRCz10):ENSDARG00000043457 (1)
  • ORTHOLOGY for gapdh (Chr: 16)
    Species Symbol Chromosome Accession # Evidence
    Human GAPDH 12
  • Gene:2597
  • OMIM:138400
  • HGNC:4141
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Gapdh 6
  • MGI:95640
  • Gene:14433
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (200)