ZFIN ID: ZDB-GENE-030115-1
Gene Name: glyceraldehyde-3-phosphate dehydrogenase
Gene Symbol: gapdh
Previous Names: gapd (1), bb02e05, cb609 (1), mg:bb02e05, wu:fb33a10, wu:ft80f05
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 32 figures from 20 publications
Directly Submitted Expression Data: 6 figures (28 images) from Thisse et al., 2001 [cb609]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  brain, eye, gill, gut (all 23) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH gapdh HUMAN ORTHOLOG No data available
GENE ONTOLOGY 
Ontology GO Term
Biological Process microtubule cytoskeleton organization (more)
Cellular Component cytosol (more)
Molecular Function glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006424 (1)
  • InterPro:IPR016040 (1)
  • InterPro:IPR020828 (1)
  • InterPro:IPR020829 (1)
  • InterPro:IPR020830 (1)
  • InterPro:IPR020831 (1)
  • PROSITE:PS00071 (1)
  • Pfam:PF00044 (1)
  • Pfam:PF02800 (1)
  • EC:1.2.1.12 (1)
  • EC:2.6.99.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gapdh-001 (1) 1331
    gapdh-002 (1) 902
    gapdh-003 (1) 445
    gapdh-004 (1) 825
    ncRNA gapdh-005 (1) 834
    GENE PRODUCT DESCRIPTION
    ANTIBODIES 
    Ab1-gapdh (1), Ab6-gapdh (1)
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gapdh No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS 
    gapdhContained in: [BAC] DKEY-260G12 (1) (order this)
    gapdhEncodes: [EST] bb02e05, cb609 (1) (order this), fb33a10 (1), ft80f05
    [cDNA] MGC:86789 (1) (order this), MGC:110724 (1) (order this)
    SEQUENCE INFORMATION 
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001115114 (1) 1329bp
    Genomic GenBank:CU861451 (1) 120950bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IGI1 (1) 336aa
    Sequence Clusters UniGene:35640 (1)
    Sequence Information (all 26)
    OTHER gapdh GENE PAGES 
  • Gene:317743 (1)
  • VEGA:OTTDARG00000032973 (1)
  • Ensembl(GRCz10):ENSDARG00000043457 (1)
  • ORTHOLOGY for gapdh (Chr: 16) 
    Species Symbol Chromosome Accession # Evidence
    Human GAPDH 12
  • Gene:2597
  • OMIM:138400
  • HGNC:4141
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Gapdh 6
  • MGI:95640
  • Gene:14433
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (185)