| ZFIN ID: ZDB-BAC-050218-762 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-222C22 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001044785 (1) | 6220 nt |
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| RefSeq:NM_130958 (1) | 3007 nt |
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| RefSeq:NM_001017539 (1) | 2371 nt |
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| RefSeq:NM_199692 (1) | 2181 nt |
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| RefSeq:NM_131769 (1) | 1681 nt |
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| RefSeq:NM_001005390 (1) | 1501 nt |
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| RefSeq:NM_001044789 (1) | 1491 nt |
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| RefSeq:NM_001017899 (1) | 1365 nt |
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| RefSeq:NM_001079957 (1) | 1280 nt |
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| RefSeq:NM_001017863 (1) | 967 nt |
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| RefSeq:XM_005165318 (1) | 7305 nt |
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| RefSeq:XM_021476169 (1) | 6507 nt |
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| RefSeq:XM_021476170 (1) | 6494 nt |
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| RefSeq:XM_021476171 (1) | 6461 nt |
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| RefSeq:XM_005165316 (1) | 6395 nt |
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| RefSeq:XM_005165311 (1) | 2326 nt |
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|
| GenBank:GFIL01028446 (1) | 7474 nt |
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| GenBank:GFIL01026473 (1) | 4562 nt |
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| GenBank:AF359430 (1) | 3542 nt |
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| GenBank:GFIL01000920 (1) | 3060 nt |
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| GenBank:GFIL01008674 (1) | 3026 nt |
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| GenBank:AF006488 (1) | 3007 nt |
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| GenBank:CU458990 (1) | 3007 nt |
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| GenBank:GFIL01032657 (1) | 2766 nt |
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| GenBank:GDQQ01012384 (1) | 2586 nt |
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| GenBank:BC076414 (1) | 2465 nt |
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| GenBank:BC092183 (1) | 2430 nt |
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| GenBank:BC098877 (1) | 2127 nt |
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| GenBank:BC044425 (1) | 2124 nt |
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| GenBank:BC121754 (1) | 2066 nt |
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| GenBank:BC096981 (1) | 2064 nt |
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| GenBank:BC116524 (1) | 2041 nt |
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| GenBank:BC095076 (1) | 2037 nt |
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| GenBank:BC129302 (1) | 2033 nt |
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| GenBank:BC077097 (1) | 1910 nt |
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| GenBank:BC142746 (1) | 1603 nt |
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| GenBank:BC171495 (1) | 1600 nt |
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| GenBank:BC171499 (1) | 1600 nt |
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| GenBank:BC071457 (1) | 1501 nt |
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| GenBank:GFIL01045657 (1) | 1459 nt |
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| GenBank:GFIL01003024 (1) | 1297 nt |
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| GenBank:BC127597 (1) | 1280 nt |
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| GenBank:BC092946 (1) | 1110 nt |
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| GenBank:GFIL01031208 (1) | 1055 nt |
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| GenBank:BC163733 (1) | 1033 nt |
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| GenBank:BC163736 (1) | 1033 nt |
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| GenBank:BC092987 (1) | 967 nt |
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| GenBank:EH465902 (1) | 962 nt |
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| GenBank:EH439002 (1) | 921 nt |
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| GenBank:EH448877 (1) | 915 nt |
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| GenBank:EH464933 (1) | 882 nt |
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| GenBank:AY934532 (1) | 874 nt |
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| GenBank:CV490399 (1) | 807 nt |
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| GenBank:DT062305 (1) | 754 nt |
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| GenBank:AW127906 (1) | 719 nt |
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| GenBank:BM775636 (1) | 668 nt |
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| GenBank:BC164987 (1) | 643 nt |
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| GenBank:BM775308 (1) | 639 nt |
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| GenBank:EB906767 (1) | 585 nt |
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| GenBank:AW115883 (1) | 514 nt |
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| GenBank:CB352301 (1) | 510 nt |
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| GenBank:AY965253 (1) | 472 nt |
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| GenBank:CB357343 (1) | 372 nt |
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| GenBank:AI584211 (1) | 197 nt |
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| Genomic | GenBank:BX005407 | 209796 nt | Blast at MegaBLAST |
| GenBank:CR382327 (1) | 151282 nt | ||
| GenBank:CU571324 (2) | 78830 nt | ||
| GenBank:CS026661 (1) | 576 nt |
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| Polypeptide | UniProtKB:A0A8M9Q3C1 (1) | 1984 aa |
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| UniProtKB:A0A8M9QDY7 (1) | 1982 aa |
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| UniProtKB:A0A8M9Q8M9 (1) | 1971 aa |
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| UniProtKB:A0A8M2BCS6 (1) | 1949 aa |
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| UniProtKB:Q1LYC2 (1) | 1947 aa |
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| UniProtKB:O57409 (1) | 615 aa |
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| UniProtKB:Q1LYD2 (1) | 615 aa |
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| UniProtKB:Q1LYC7 (1) | 495 aa |
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| UniProtKB:A0A8M2BCK7 (1) | 444 aa |
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| UniProtKB:Q1LYC5 (1) | 419 aa |
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| UniProtKB:Q1LYC6 (1) | 401 aa |
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| UniProtKB:A0PJS9 (1) | 310 aa |
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| UniProtKB:Q6IQE9 (1) | 234 aa |
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| UniProtKB:Q1LYC9 (1) | 216 aa |
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| UniProtKB:A0A8N7UZN0 (1) | 210 aa |
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| UniProtKB:Q90XR4 (1) | 210 aa |
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| UniProtKB:Q803L7 (1) | 191 aa |
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| UniProtKB:Q568A3 (1) | 156 aa |
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| UniProtKB:Q567W8 (1) | 152 aa |
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| RefSeq:NP_571033 (1) | 615 aa |
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| RefSeq:NP_001017539 (1) | 337 aa |
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| RefSeq:NP_001073426 (1) | 310 aa |
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| RefSeq:NP_001005390 (1) |
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| RefSeq:NP_001017863 (1) |
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| RefSeq:NP_001017899 (1) |
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| RefSeq:NP_001038250 (1) |
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| RefSeq:NP_001038254 (1) |
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| RefSeq:NP_571844 (1) |
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| RefSeq:NP_955986 (1) |
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| RefSeq:XP_005165368 (1) |
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| RefSeq:XP_005165373 (1) |
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| RefSeq:XP_005165375 (1) |
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| RefSeq:XP_021331844 (1) |
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| RefSeq:XP_021331845 (1) |
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| RefSeq:XP_021331846 (1) |
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| GenPept:CAK04559 (1) | 1947 aa |
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| GenPept:AAC41241 (1) | 615 aa |
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| GenPept:AAH76414 (1) | 615 aa |
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| GenPept:CAM73251 (1) | 615 aa |
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| GenPept:O57409 (1) | 615 aa |
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| GenPept:AAH77097 (1) | 587 aa |
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| GenPept:AAH95076 (1) | 583 aa |
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| GenPept:AAH96981 (1) | 583 aa |
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| GenPept:AAH98877 (1) | 583 aa |
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| GenPept:AAI16525 (1) | 583 aa |
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| GenPept:AAI21755 (1) | 583 aa |
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| GenPept:AAI29303 (1) | 583 aa |
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| GenPept:AAI71495 (1) | 495 aa |
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| GenPept:AAI71499 (1) | 495 aa |
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| GenPept:CAK04554 (1) | 495 aa |
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| GenPept:AAI42747 (1) | 368 aa |
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| GenPept:CAK04547 (1) | 353 aa |
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| GenPept:AAH92183 (1) | 337 aa |
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| GenPept:AAI27598 (1) | 310 aa |
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| GenPept:AAH71457 (1) | 234 aa |
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| GenPept:Q6IQE9 (1) | 234 aa |
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| GenPept:CAK04552 (1) | 216 aa |
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| GenPept:AAI63733 (1) | 210 aa |
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| GenPept:AAI63736 (1) | 210 aa |
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| GenPept:AAL01837 (1) | 210 aa |
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| GenPept:AAH44425 (1) | 191 aa |
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| GenPept:AAI64987 (1) | 191 aa |
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| GenPept:CAI61797 (1) | 191 aa |
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| GenPept:AAY32932 (1) | 157 aa |
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| GenPept:AAH92946 (1) | 156 aa |
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| GenPept:AAH92987 (1) | 152 aa |
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| GenPept:AAY23993 (1) | 151 aa |
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CH211-222C22 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] alkbh6 (11) | RNA | RefSeq:NM_001005390 | 1501 |
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| RNA | GenBank:GFIL01000920 | 3060 |
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| RNA | GenBank:BC071457 | 1501 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q6IQE9 | 234 |
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| Polypeptide | RefSeq:NP_001005390 |
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| Polypeptide | GenPept:Q6IQE9 | 234 |
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| Polypeptide | GenPept:AAH71457 | 234 |
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| [GENE] capns1a (17) | RNA | RefSeq:NM_001017899 | 1365 |
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| RNA | GenBank:GFIL01003024 | 1297 |
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| RNA | GenBank:BC092946 | 1110 |
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| RNA | GenBank:CV490399 | 807 |
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| RNA | GenBank:CB352301 | 510 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q1LYC9 | 216 |
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| Polypeptide | UniProtKB:Q568A3 | 156 |
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| Polypeptide | RefSeq:NP_001017899 |
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| Polypeptide | GenPept:CAK04552 | 216 |
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| Polypeptide | GenPept:AAH92946 | 156 |
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| [GENE] cldnj (20) | RNA | RefSeq:NM_131769 | 1681 |
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| RNA | GenBank:AF359430 | 3542 |
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| RNA | GenBank:BC163736 | 1033 |
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| RNA | GenBank:BC163733 | 1033 |
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| Genomic | GenBank:CR382327 | 151282 | ||
| Polypeptide | UniProtKB:Q90XR4 | 210 |
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| Polypeptide | UniProtKB:A0A8N7UZN0 | 210 |
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| Polypeptide | RefSeq:NP_571844 |
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| Polypeptide | GenPept:AAL01837 | 210 |
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| Polypeptide | GenPept:AAI63736 | 210 |
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| Polypeptide | GenPept:AAI63733 | 210 |
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| [GENE] dlb (95) | RNA | RefSeq:NM_130958 | 3007 |
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| RNA | GenBank:GFIL01008674 | 3026 |
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| RNA | GenBank:CU458990 | 3007 |
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|
| RNA | GenBank:AF006488 | 3007 |
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|
| RNA | GenBank:BC076414 | 2465 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q1LYD2 | 615 |
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| Polypeptide | UniProtKB:O57409 | 615 |
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| Polypeptide | RefSeq:NP_571033 | 615 |
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| Polypeptide | GenPept:O57409 | 615 |
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| Polypeptide | GenPept:CAM73251 | 615 |
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| Polypeptide | GenPept:AAH76414 | 615 |
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| Polypeptide | GenPept:AAC41241 | 615 |
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| [GENE] exoc3l2a (8) | Polypeptide | GenPept:CAK04547 | 353 |
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| [GENE] micu2 (10) | RNA | RefSeq:NM_001017539 | 2371 |
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| RNA | RefSeq:XM_005165311 | 2326 |
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| RNA | GenBank:GFIL01026473 | 4562 |
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| RNA | GenBank:BC092183 | 2430 |
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| RNA | GenBank:EH465902 | 962 |
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| RNA | GenBank:EH439002 | 921 |
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| RNA | GenBank:EH448877 | 915 |
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| RNA | GenBank:EH464933 | 882 |
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| RNA | GenBank:DT062305 | 754 |
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| RNA | GenBank:EB906767 | 585 |
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|
| RNA | GenBank:AI584211 | 197 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q1LYC5 | 419 |
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| Polypeptide | UniProtKB:Q1LYC6 | 401 |
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| Polypeptide | RefSeq:XP_005165368 |
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| Polypeptide | RefSeq:NP_001017539 | 337 |
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|
| Polypeptide | GenPept:AAH92183 | 337 |
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|
| [GENE] nova1 (13) | RNA | RefSeq:XM_005165318 | 7305 |
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| RNA | RefSeq:NM_001044789 | 1491 |
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| RNA | GenBank:GFIL01028446 | 7474 |
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| RNA | GenBank:BC171499 | 1600 |
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|
| RNA | GenBank:BC171495 | 1600 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q1LYC7 | 495 |
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| Polypeptide | UniProtKB:A0A8M2BCK7 | 444 |
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|
| Polypeptide | RefSeq:XP_005165375 |
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||
| Polypeptide | RefSeq:NP_001038254 |
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||
| Polypeptide | GenPept:CAK04554 | 495 |
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|
| Polypeptide | GenPept:AAI71499 | 495 |
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|
| Polypeptide | GenPept:AAI71495 | 495 |
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| [GENE] ppp1r14aa (11) | RNA | RefSeq:NM_001017863 | 967 |
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| RNA | GenBank:GFIL01031208 | 1055 |
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| RNA | GenBank:BC092987 | 967 |
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| RNA | GenBank:AY934532 | 874 |
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| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:Q567W8 | 152 |
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|
| Polypeptide | RefSeq:NP_001017863 |
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||
| Polypeptide | GenPept:AAH92987 | 152 |
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| Polypeptide | GenPept:AAY23993 | 151 |
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| [GENE] rhogc (8) | RNA | RefSeq:NM_199692 | 2181 |
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| RNA | GenBank:GFIL01032657 | 2766 |
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| RNA | GenBank:BC044425 | 2124 |
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|
| RNA | GenBank:BC164987 | 643 |
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|
| RNA | GenBank:AY965253 | 472 |
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|
| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Genomic | GenBank:CS026661 | 576 |
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|
| Polypeptide | UniProtKB:Q803L7 | 191 |
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|
| Polypeptide | RefSeq:NP_955986 |
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| Polypeptide | GenPept:CAI61797 | 191 |
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| Polypeptide | GenPept:AAI64987 | 191 |
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| Polypeptide | GenPept:AAH44425 | 191 |
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| Polypeptide | GenPept:AAY32932 | 157 |
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| [GENE] taf1 (19) | RNA | RefSeq:XM_021476169 | 6507 |
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| RNA | RefSeq:XM_021476170 | 6494 |
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| RNA | RefSeq:XM_021476171 | 6461 |
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|
| RNA | RefSeq:XM_005165316 | 6395 |
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|
| RNA | RefSeq:NM_001044785 | 6220 |
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| RNA | GenBank:GDQQ01012384 | 2586 |
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| RNA | GenBank:BC098877 | 2127 |
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| RNA | GenBank:BC121754 | 2066 |
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| RNA | GenBank:BC096981 | 2064 |
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| RNA | GenBank:BC116524 | 2041 |
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|
| RNA | GenBank:BC095076 | 2037 |
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|
| RNA | GenBank:BC129302 | 2033 |
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|
| RNA | GenBank:BC077097 | 1910 |
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|
| RNA | GenBank:BC142746 | 1603 |
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|
| RNA | GenBank:AW127906 | 719 |
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|
| RNA | GenBank:BM775636 | 668 |
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|
| RNA | GenBank:BM775308 | 639 |
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|
| RNA | GenBank:AW115883 | 514 |
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|
| RNA | GenBank:CB357343 | 372 |
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|
| Genomic | GenBank:BX005407 | 209796 | Blast at MegaBLAST | |
| Polypeptide | UniProtKB:A0A8M9Q3C1 | 1984 |
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|
| Polypeptide | UniProtKB:A0A8M9QDY7 | 1982 |
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|
| Polypeptide | UniProtKB:A0A8M9Q8M9 | 1971 |
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|
| Polypeptide | UniProtKB:A0A8M2BCS6 | 1949 |
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|
| Polypeptide | UniProtKB:Q1LYC2 | 1947 |
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|
| Polypeptide | RefSeq:XP_021331846 |
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| Polypeptide | RefSeq:XP_021331845 |
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| Polypeptide | RefSeq:XP_021331844 |
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||
| Polypeptide | RefSeq:XP_005165373 |
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||
| Polypeptide | RefSeq:NP_001038250 |
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| Polypeptide | GenPept:CAK04559 | 1947 |
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|
| Polypeptide | GenPept:AAH77097 | 587 |
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|
| Polypeptide | GenPept:AAI29303 | 583 |
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|
| Polypeptide | GenPept:AAI21755 | 583 |
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|
| Polypeptide | GenPept:AAI16525 | 583 |
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|
| Polypeptide | GenPept:AAH98877 | 583 |
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| Polypeptide | GenPept:AAH96981 | 583 |
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|
| Polypeptide | GenPept:AAH95076 | 583 |
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|
| Polypeptide | GenPept:AAI42747 | 368 |
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| [GENE] zgc:158432 (4) | RNA | RefSeq:NM_001079957 | 1280 |
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| RNA | GenBank:GFIL01045657 | 1459 |
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| RNA | GenBank:BC127597 | 1280 |
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| Genomic | GenBank:CU571324 | 78830 | ||
| Polypeptide | UniProtKB:A0PJS9 | 310 |
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| Polypeptide | RefSeq:NP_001073426 | 310 |
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| Polypeptide | GenPept:AAI27598 | 310 |
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