ZFIN ID: ZDB-GENE-060526-113
Gene Name: NOVA alternative splicing regulator 1
Gene Symbol: nova1    Nomenclature History

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Previous Name: si:ch211-222c22.9

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have mRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to cytoplasm and nucleus. Orthologous to several human genes including NOVA2 (NOVA alternative splicing regulator 2).
Genome Resources: Alliance (1),  Gene:555590 (1),  Ensembl(GRCz11):ENSDARG00000020178 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015664Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la015665Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nova1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nova1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA splicing, via spliceosome (more)
    Cellular Component cytoplasm (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nova1-201 (1)    Ensembl 1600
    nova1-202 (1)    Ensembl 917
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nova1 No data available
    MARKER RELATIONSHIPS
    nova1 Contained in: [BAC] CH211-222C22 (1)
    nova1 Encodes: [cDNA] MGC:198222 (1), MGC:198226 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001044789 (1) 1491 nt
    Genomic GenBank:BX005407 (1) 209796 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q1LYC7 (1) 495 aa
    Sequence Information (all 17)
    ORTHOLOGY for nova1 ( Chr: 5 )
    CITATIONS (22)