Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
3	62.2 cM	z22555	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
3	117.5 cM	z22555	Mother of Pearl (MOP)	Postlethwait, John H.	Data
3	367.75 cR	Z22555	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
3	69.5 cM	z22555	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z8680	SSLP	3		Dodou et al., 2004	Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555. Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555.
zic2a	GENE	3		Dodou et al., 2004	Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555. Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555.
z10067	SSLP	3		Perkins et al., 2005	Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed  ... Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is likely to be less than 3 cM from z30645.
z30645	SSLP	3		Perkins et al., 2005	Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed  ... Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is likely to be less than 3 cM from z30645.
fmv69	Feature	3		Perkins et al., 2005	Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed  ... Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is likely to be less than 3 cM from z30645.
z1209	SSLP	3		Perkins et al., 2005	Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed  ... Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is likely to be less than 3 cM from z30645.

OTHER MAPPING INFORMATION

Chr 3 Perkins et al., 2005 Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is  ... Using bulk segregant analysis, Perkins et al. (Dev. Dyn. 233:680, 2005) showed that dzd fmv69 is likely to be less than 3 cM from z30645.   Chr 3 Dodou et al., 2004 Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555. Dodou et al., 2004, report mapping zic2a to LG3 between z860 and z22555.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,184		60.0
Forward Primer	CAAATCTGATCTGGGTGGCT
Reverse Primer	GAGGAGACCGAAACACTTGC
IND	0,172		60.0
Forward Primer	CAAATCTGATCTGGGTGGCT
Reverse Primer	GAGGAGACCGAAACACTTGC
EKW	172,198,184		60.0
Forward Primer	CAAATCTGATCTGGGTGGCT
Reverse Primer	GAGGAGACCGAAACACTTGC