ZFIN ID: ZDB-GENE-000710-4
Gene Name: zic family member 2 (odd-paired homolog, Drosophila), a
Gene Symbol: zic2a
Sequence Ontology ID : SO:0000704

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Previous Names: zic2.1 (1), zic2 (1), cb851 (1), fb26a03, wu:fb26a03

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 35 figures from 19 publications
Directly Submitted Expression Data: 6 figures (19 images) from Thisse et al., 2001 [cb851]
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
mn0133Gt Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 18 figures from 4 publications
    Observed in:
    DISEASE ASSOCIATED WITH zic2a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    holoprosencephaly 5 Holoprosencephaly 5 609637
    DISEASE ASSOCIATED WITH zic2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process diencephalon development (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zic2a-001 (1) 3177
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM zic2a
    MARKER RELATIONSHIPS
    zic2aContained in: [BAC] CH211-277G23 (1) (order this)
    zic2aEncodes: [EST] cb851 (1), fb26a03
    [cDNA] MGC:76802 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131558 (1) 3132bp
    Genomic GenBank:BX469902 (1) 179135bp
    Select Tool
    Polypeptide UniProtKB:Q9IAT0 (1) 445aa
    Sequence Clusters UniGene:76889 (1)
    Sequence Information (all 14)
    OTHER zic2a GENE PAGES
  • Alliance (1)
  • Gene:58077 (1)
  • VEGA:OTTDARG00000020717 (1)
  • Ensembl(GRCz11):ENSDARG00000015554 (1)
  • ORTHOLOGY for zic2a (Chr: 9)
    CITATIONS (49)