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General Information
ZIRC
ZFIN ID: ZDB-TSCRIPT-160112-325
Transcript Name: cacna1da-202
Previous Name: cacna1da-002

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Attribution

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Transcript Type: mRNA
Annotation Status:
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000062273 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000062273|OTTDARG00000020450| cacna1da|OTTDARP00000048672 cacna1da-002 LG_none 4830 1 BX571969.5,FQ323136.2,CABZ01048890.1,CABZ01065553.1,CABZ01065554.1,CABZ01065555.1,BX248521.12 Danio rerio protein_coding KNOWN, 5981 bp
CAGGAAACAGTCGAATATGCCTTCCTTATCATTTTCACGA
TCGAAACCTTCCTGAAGATTATAGCGTACGGCTTGGTGAT
GCATCAGAACGCTTATGTCCGGAATGGATGGAACATGCTG
GATTTCGTCATTGTCGTCATTGGATTGTTTAGTGTTGTCT
TGGAAGTGCTGACCAAAGAAGGGGGTGAGAAGGAAGAAGT
TGGAGAAAATCTCTCCGCTCATGGCCATGGAGGAAAACCA
GGAGGTTTCGATGTTAAAGCCCTCAGAGCCTTTCGAGTGC
TGCGACCGCTTCGCCTGGTCTCAGGAGTGCCCAGTTTACA
GGTGGTGCTGAACTCCATCATTAAAGCCATGGTTCCTCTC
CTCCACATCGCCCTGCTGGTTCTGTTTGTCATCATCATCT
ATGCTATTATCGGTTTGGAGCTTTTCATTGGAAAAATGCA
CGCTTCCTGTTATTTCCAAGGGACAGATATTTTAGAGGAT
GAACCGGCACCGTGTGCGGTGAATGGTCACGGCCGCACAT
GCCCCATTAACGGCACTCTGTGTAAAGAAGGCTGGCAAGG
ACCCAACGGAGGCATCACCAACTTCGACAACTTCATGTTC
GCCATGCTCACTGTGTTTCAATGCATTACCATGGAGGGCT
GGACGGACGTGCTTTATTGGATGAATGATGCTATGGGTTT
GGAGCTGCCCTGGGTGTACTTTGTGAGTTTGGTGATCTTC
GGCTCTTTCTTCGTCTTGAACCTGGTTCTGGGTGTGTTGA
GCGGAGAGTTCTCTAAAGAGCGAGAGAAGGCGAAGGCTCG
TGGAGATTTCCAGAAGCTTCGAGAGAAACAGCAGCTGGAG
GAAGATCTGAAAGGTTATCTGGACTGGATCACGCAGGCTG
AGGACATCGACCCTGAGAACGAGGAGGAAGAGGAGGAGAG
CAAACGCAACCCGAGTATGCCGGCAAGTGAGACTGAATCC
ATGAATACAGAGAACGAGAAAGGAGAAGATGAGAAGGCGA
CATGTTGCGGCCCGACATGTCAAAAAATATCAAAATCAAA
GTTCAGTCGGCGCTGGCGTCGCTGGAACCGGTTGTGTCGG
AGGAATTGTCGCTTGGCTGTAAAATCTGTGCCATTCTATT
GGCTGGTAATCATCCTGGTGTTCCTGAACACTTTGACCAT
CTCTTCAGAACATTACAACCAGCCCATGTGGCTCACACAA
GTACAGGATGTGGCTAATAAAGTGCTGCTGGCCATGTTCA
CGTGTGAGATGTTGGTGAAGATGTACAGTCTGGGCCTGCA
GGCTTATTTTGTGTCTCTTTTTAATCGCTTTGACTGCTTT
GTGGTGTGTGGAGGCATCACTGAAACCATCCTTGTGGAGT
TTGAGATTATGTCACCCCTCGGCATCTCAGTGTTTCGATG
TGTTCGACTTCTCAGGATCTTTAAAGTTACACGCCACTGG
GCGTCTCTCAGTAACCTGGTGGCATCTCTGCTGAACTCCA
TGAAGTCCATTGCTTCTCTACTGCTGCTGCTCTTCCTCTT
CATCATCATCTTTAGCCTCCTCGGTATGCAGGTGTTCGGC
GGCAAGTTTAACTTTGACGAGACACAAACCAAGAGGAGCA
CCTTTGACAACTTCCCTCAGGCCTTGCTCACTGTGTTTCA
GATTCTAACTGGTGAAGACTGGAATGCCGTCATGTATGAC
GGAATTATGGCGTACGGCGGCCCTTCGTCATCAGGAATGA
TTGTGTGCATATACTTCATCATCCTTTTCATCTGTGGAAA
CTACATTCTCCTGAATGTGTTCTTGGCTATCGCTGTGGAC
AATCTTGCTGATGCAGAGTCTCTGAACACGGACGATACGA
AGAAACCTGATGAAATCGACGAAATTGAAGATGAAGCCAA
GGCTGGAGAGGAGGATGAGAAGGATAATGCCGAGGAGGAT
GAAGAAGAGCCAGATGTTCCTGCAGGGCCTCGTCCAAAGA
TCTCAGAGCTTGTTAAGAAGGAGAAGATCACTCCAATCCC
AGAGGGCAGTGCGTTCTTCATCTTCAGCAACACAAACCCA
GTTCGAGTCGCCTGCCACAAGCTGATAAACCACCACATCT
TCACCAACCTCATCCTTGTGTTCATTATGCTAAGCTCAGC
GTCATTGGCTGCTGAGGATCCAATCAGAAACTTCTCTGCT
AGGAATATTGTCCTAGGCTATGCAGATTATGTCTTCACTA
GTATGTTTACATTTGAGATCGTGTTAAAGATGACCACGTA
TGGCGCTTTTCTCCATAAGGGTGCTTTCTGCAGGAACTAC
TTTAATCTTCTAGATCTGCTGGTGGTCGGAGTTTCGCTCG
TGTCCTTCGGGATTCAATCATCGGCCATCTCAGTGGTGAA
GATTCTGAGGGTTCTGAGAGTTTTGCGTCCACTCAGAGCC
ATAAACAGAGCTAAAGGACTAAAGCATGTGGTCCAGTGTG
TGTTTGTGGCCATCAGGACTATAGGAAACATCATGATCGT
CACCACTCTGCTGCAGTTTATGTTCGCCTGCATTGGTGTC
CAGCTCTTCAAGGGAAAGTTTTACCGTTGTAACGATGAGG
CCAAGTCCAGCCCAGAGGAGTGCAAGGGAACGTACATCAT
GTATAAGGAAGGAGACGTGAACCAGCCAATCATTCAGAAG
CGCCACTGGCACAACAGTGATTTCAACTTTGACAATGTGC
TCATGGCCATGATGGCTCTGTTCACCGTGTCCACGTTTGA
AGGCTGGCCAGCGTTGCTGTACAAGGCCATCGACTCCAAC
CGGGAGAACATGGGTCCCATCTACAACTACCGAGTGGAGA
TTTCCATCTTCTTCATCATCTACATCATCATCATCGCTTT
CTTTATGATGAACATCTTTGTGGGTTTCGTCATCGTGACC
TTTCAGGAACAGGGAGAGAAGGAGTACAAGAACTGTGAGC
TGGACAAGAACCAGCGTCAGTGTGTGGAGTATGCATTGAA
AGCACGTCCTCTCAGGAGGTACATCCCAAAGAACCCATAT
CAGTATAAGTTCTGGTATGTGGTGAACTCCACCGGCTTCG
AGTACATCATGTTTGTCCTGATTTTACTCAACACCATCTG
TCTCGCCGTGCAGCACTATGGTCAGTCTGAGCTCTTCAAT
TATGTTATGGACATTCTGAATATGGTCTTCACTGCCGTCT
TCACTGTGGAGATGGTGCTCAAGCTGATCGCCTTCAAGCC
TCGGCATTATTTCACTGACGCATGGAACACATTTGACGCC
TTAATTGTTGTCGGTAGCGTCGTAGATATTGCTATCACTG
AAGTCAACCCCACAGAGGCACCTCAGGTGGATGAGTCGGG
GAACACTGAGGACAGCGCTCGCATTTCCATCACTTTCTTC
CGTCTTTTTCGAGTGATGCGATTGGTCAAGCTGCTGAGCA
GAGGGGAGGGAATTCGAACCCTACTCTGGACCTTTATCAA
ATCCTTCCAGGCACTGCCTTATGTTGCTTTGCTGATAGCC
ATGCTCTTCTTCATCTACGCTGTCATTGGCATGCAGGTGT
TTGGGAAAATTGCCATGGTGGATCACACTCAAATCAACAG
GAACAACAACTTTCAGACGTTCCCTCAGGCTGTGCTTCTG
CTCTTCAGGTGTGCTACGGGTGAAGCCTGGCAGGAGATCA
TGTTAGCATGTATGCCAGGCAAGCTGTGTGACCCGGAGTC
AGACTATAATCCTGGGGAAGAAATGACCTGCGGGAGCAGT
TTCGCCATCATCTACTTCATCACCTTCTACATGCTCTGCG
CCTTCCTGATCATTAACCTGTTTGTGGCTGTCATCATGGA
CAACTTCGACTATCTGACCCGTGATTGGTCAATTCTGGGG
CCACATCACCTTGATGAGTTTAAGAGGATTTGGTCAGAAT
ATGACCCAGAGGCCAAGGGCAGAATAAAACATCTTGATGT
AGTGACGTTGTTGCGCCGTATTCAGCCTCCTCTCGGCTTT
GGGAAACTCTGTCCTCATAGAGTCGCCTGCAAGAGGCTGG
TGGCTATGAACATGCCCCTGAACAGTGACGGCACGGTCAT
GTTTAACGCGACACTGTTTGCTCTCGTGAGAACCGCATTG
AAAATCAAAACAGAAGGTAACCTAGAACAAGCGAATGAAG
AGCTCCGAGCTGTGATTAAGAAGATCTGGAAGAGAACCAG
CATGAAGCTTCTGGATCAAGTGGTTCCCCCTGCTGGTGAT
GATGAGGTAACGGTGGGGAAGTTCTATGCCACTTTCCTGA
TACAGGACTACTTTAGGAAATTCAAGAAACGCAAAGAGGA
AGGCCTGGTGGGAGTTCATCCGGCACAGAACAACACGGCC
ATCGCACTGCAGGCTGGCCTTCGTACGCTGCATGACATTG
GGCCAGAAATCCGCCGTGCGATATCATGTGACCTGCAGGA
TGATGAGCTAGTAGACTTTATACCAGAGGAGGACGAAGAA
ATTTATAGGCGAAACGGAGGACTCTTTGGCAACCACATCA
ACCACATAAACGGAGACCCCCGGAGGAGCTCTGGCCACCA
AACAAACGCCACACAGCGCCCCCTGCAGGTGCAGCCGCCC
CCACATTACGTCCACATGGAGCAGCCCGTGGGGCGTCTGG
GTCGCGCCAATGCCATGGCACAGCAAAACCATCATCGTCA
CCACCACCACCATCACCATCATCATCATCACAACAACTCC
TACAACAAATCGCCCAAGTCCACCAACATCAACCTCAACA
ACGCCAACGTGTCCAGTTTACCCAATGGTGGACACAATCG
CTACTACGAACACGCTCCCGCTAATGGCTACCCAGGGTCA
TATTACGGAGAATACGACAAGCCCAGGACCCCTCATGGGC
AAAGAAGGCGCTACTATGAGACATATATTAGATCGCAGGG
CAGCGACAGAAGACGACCCACGATACGCCGCGAAGAGGAG
TATGAAGAAGATCGCTACTCTGGAGAGTATTACAGCGGAG
AGGAGTTTTATGAAGATGACAGCATGCTATCGGGTGATAG
GTACCCCAACAGTGACCAGGAGTACGAGACGCCGCGGGGT
TACCATCATCCTGACAGTTACTATGAAGATGATGAGCAGC
CCCTTTATCACGATTCACATAGGTCACCAAAGAGAAGACT
GCTTCCTCCAACACCGCAAGGTAATCGGAGACCGTCGTTC
AATTTTGAGTGTCTGCGCAGACAGAGCAGTCAAGACGATC
TTCCTCACCAGCGAACTGCTCTTCCGTTACATCTCATGCA
ACACCAGGTGATGGCAGTGGCGGGTCTGGACTCTAGCAGG
GCTCACAGGCTTTCACCAACTCGATCTACCAGATCATGGG
CTTCACCTCCTCCAACTCCTGCAAGTAAAGACCGGACGCC
GTACTACACACCGCTCATCCGCGTGGACCGTCCTCTAAGA
GACAGCGCCAGCAGCAGCCATTCATCCATCAGGAAGAGCT
CGTGGTACACAGACGACCCTGAGTACCAGCAGAGGAACTT
CTCACCTGTTCACCTGCAGGTCCCACCCGAGTACAGGAAC
CAGTACCTGCAGAAGAGAGGCAGCGCTACCAGCCTGGTGG
AGGCGGTCTTGATATCAGAAGGACTGGGTCGATACGCCAA
GGATCCCAAATTTGTGGCCGCCACAAAGCATGAGATTGCG
GACGCGTGCGAGATGACCATTGACGAAATGGAAAGCGCCG
CCAGCCATCTTCTTAACGGTGGCATTACACCAGTAGTCAA
CGGAGTCAATGTGTTTCCCATACTGGGCCACAGAGACTAC
GAGCTGCAGGACGTCTCGGCGAGCTACAGCGACGAGGAGC
CCGAACCCGAGCCCAGACCTCGTTACGAGGAGGACCTTGC
AGATGAAATGATATGCATTACCACTTTATAGCACCTGGTT
TGCTAAAAACTGATTTAGCGAAACAAACAAATATAAAGTT
TATTTATTGGCTTACTACCTAAAGAAGTGCCTTCACAGCA
GAGCAGAAAGGCACCACAGGA

cacna1da TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA cacna1da-003 (1) 546
ncRNA cacna1da-004 (1) 840
mRNA cacna1da-202 5981
cacna1fb-207 (1) 6662
ottdart00000001787 (1) 2432
ottdart00000001972 (1) 4125
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
cacna1da-202 Contained in:

OTHER cacna1da-202 TRANSCRIPT PAGES
  • Vega_Trans:OTTDART00000062273 (1)
  • Ensembl_Trans:ENSDART00000168528 (1)
  • PROTEIN PRODUCTSNo links to external site
    ZEBRAFISH SUPPORTING SEQUENCES
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:BC163679 (1) 6421bp
    CITATIONS (2)