ZFIN ID: ZDB-TSCRIPT-090929-8308
Transcript Name: cacna1da-001
Previous Names: cacna1d-001, ottdart00000025578

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Attribution

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Transcript Type: mRNA
Annotation Status:
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000025578 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000025578|OTTDARG00000020450|ZDB-GENE-030616-135 cacna1da|OTTDARP00000021032 cacna1da-001 LG_none 4830 1 BX571969.5,FQ323136.2,CABZ01048890.1,CABZ01065553.1,CABZ01065554.1,CABZ01065555.1,BX248521.12 Danio rerio protein_coding KNOWN, 6662 bp
GAAACAGTCGAATATGCCTTCCTTATCATTTTCACGATCG
AAACCTTCCTGAAGATTATAGCGTACGGCTTGGTGATGCA
TCAGAACGCTTATGTCCGGAATGGATGGAACATGCTGGAT
TTCGTCATTGTCGTCATTGGATTGTTTAGTGTTGTCTTGG
AAGTGCTGACCAAAGAAGGGGGTGAGAAGGAAGAAGTTGG
AGAAAATCTCTCCGCTCATGGCCATGGAGGAAAACCAGGA
GGTTTCGATGTTAAAGCCCTCAGAGCCTTTCGAGTGCTGC
GACCGCTTCGCCTGGTCTCAGGAGTGCCCAGTTTACAGGT
GGTGCTGAACTCCATCATTAAAGCCATGGTTCCTCTCCTC
CACATCGCCCTGCTGGTTCTGTTTGTCATCATCATCTATG
CTATTATCGGTTTGGAGCTTTTCATTGGAAAAATGCACGC
TTCCTGTTATTTCCAAGGGACAGATATTTTAGAGGATGAA
CCGGCACCGTGTGCGGTGAATGGTCACGGCCGCACATGCC
CCATTAACGGCACTCTGTGTAAAGAAGGCTGGCAAGGACC
CAACGGAGGCATCACCAACTTCGACAACTTCATGTTCGCC
ATGCTCACTGTGTTTCAATGCATTACCATGGAGGGCTGGA
CGGACGTGCTTTATTGGATGAATGATGCTATGGGTTTGGA
GCTGCCCTGGGTGTACTTTGTGAGTTTGGTGATCTTCGGC
TCTTTCTTCGTCTTGAACCTGGTTCTGGGTGTGTTGAGCG
GAGAGTTCTCTAAAGAGCGAGAGAAGGCGAAGGCTCGTGG
AGATTTCCAGAAGCTTCGAGAGAAACAGCAGCTGGAGGAA
GATCTGAAAGGTTATCTGGACTGGATCACGCAGGCTGAGG
ACATCGACCCTGAGAACGAGGAGGAAGAGGAGGAGAGCAA
ACGCAACCGGGTTACACTTGCCAGCCTCATGGAGAAGAAG
AAGAAGGGGTTTGGCTGGTTCAGCCAGTCCTCTGACACTC
ATGCGAGTATGCCGGCAAGTGAGACTGAATCCATGAATAC
AGAGAACGAGAAAGGAGAAGATGAGAAGGCGACATGTTGC
GGCCCGACATGTCAAAAAATATCAAAATCAAAGTTCAGTC
GGCGCTGGCGTCGCTGGAACCGGTTGTGTCGGAGGAATTG
TCGCTTGGCTGTAAAATCTGTGCCATTCTATTGGCTGGTA
ATCATCCTGGTGTTCCTGAACACTTTGACCATCTCTTCAG
AACATTACAACCAGCCCATGTGGCTCACACAAGTACAGGA
TGTGGCTAATAAAGTGCTGCTGGCCATGTTCACGTGTGAG
ATGTTGGTGAAGATGTACAGTCTGGGCCTGCAGGCTTATT
TTGTGTCTCTTTTTAATCGCTTTGACTGCTTTGTGGTGTG
TGGAGGCATCACTGAAACCATCCTTGTGGAGTTTGAGATT
ATGTCACCCCTCGGCATCTCAGTGTTTCGATGTGTTCGAC
TTCTCAGGATCTTTAAAGTTACACGCCACTGGGCGTCTCT
CAGTAACCTGGTGGCATCTCTGCTGAACTCCATGAAGTCC
ATTGCTTCTCTACTGCTGCTGCTCTTCCTCTTCATCATCA
TCTTTAGCCTCCTCGGTATGCAGGTGTTCGGCGGCAAGTT
TAACTTTGACGAGACACAAACCAAGAGGAGCACCTTTGAC
AACTTCCCTCAGGCCTTGCTCACTGTGTTTCAGATTCTAA
CTGGTGAAGACTGGAATGCCGTCATGTATGACGGAATTAT
GGCGTACGGCGGCCCTTCGTCATCAGGAATGATTGTGTGC
ATATACTTCATCATCCTTTTCATCTGTGGAAACTACATTC
TCCTGAATGTGTTCTTGGCTATCGCTGTGGACAATCTTGC
TGATGCAGAGTCTCTGAACACGGACGATACGAAGAAACCT
GATGAAATCGACGAAATTGAAGATGAAGCCAAGGCTGGAG
AGGAGGATGAGAAGGATAATGCCGAGGAGGATGAAGAAGA
GCCAGATGTTCCTGCAGGGCCTCGTCCAAAGATCTCAGAG
CTTGTTAAGAAGGAGAAGATCACTCCAATCCCAGAGGGCA
GTGCGTTCTTCATCTTCAGCAACACAAACCCAGTTCGAGT
CGCCTGCCACAAGCTGATAAACCACCACATCTTCACCAAC
CTCATCCTTGTGTTCATTATGCTAAGCTCAGCGTCATTGG
CTGCTGAGGATCCAATCAGAAACTTCTCTGCTAGGAATAT
TATACTTGGTTACTTTGACTATGCTTTCACGGCTATCTTT
ACTGTAGAGATCGTGTTAAAGATGACCACGTATGGCGCTT
TTCTCCATAAGGGTGCTTTCTGCAGGAACTACTTTAATCT
TCTAGATCTGCTGGTGGTCGGAGTTTCGCTCGTGTCCTTC
GGGATTCAATCATCGGCCATCTCAGTGGTGAAGATTCTGA
GGGTTCTGAGAGTTTTGCGTCCACTCAGAGCCATAAACAG
AGCTAAAGGACTAAAGCATGTGGTCCAGTGTGTGTTTGTG
GCCATCAGGACTATAGGAAACATCATGATCGTCACCACTC
TGCTGCAGTTTATGTTCGCCTGCATTGGTGTCCAGCTCTT
CAAGGGAAAGTTTTACCGTTGTAACGATGAGGCCAAGTCC
AGCCCAGAGGAGTGCAAGGGAACGTACATCATGTATAAGG
AAGGAGACGTGAACCAGCCAATCATTCAGAAGCGCCACTG
GCACAACAGTGATTTCAACTTTGACAATGTGCTCATGGCC
ATGATGGCTCTGTTCACCGTGTCCACGTTTGAAGGCTGGC
CAGCGTTGCTGTACAAGGCCATCGACTCCAACCGGGAGAA
CATGGGTCCCATCTACAACTACCGAGTGGAGATTTCCATC
TTCTTCATCATCTACATCATCATCATCGCTTTCTTTATGA
TGAACATCTTTGTGGGTTTCGTCATCGTGACCTTTCAGGA
ACAGGGAGAGAAGGAGTACAAGAACTGTGAGCTGGACAAG
AACCAGCGTCAGTGTGTGGAGTATGCATTGAAAGCACGTC
CTCTCAGGAGGTACATCCCAAAGAACCCATATCAGTATAA
GTTCTGGTATGTGGTGAACTCCACCGGCTTCGAGTACATC
ATGTTTGTCCTGATTTTACTCAACACCATCTGTCTCGCCG
TGCAGCACTATGGTCAGTCTGAGCTCTTCAATTATGTTAT
GGACATTCTGAATATGGTCTTCACTGCCGTCTTCACTGTG
GAGATGGTGCTCAAGCTGATCGCCTTCAAGCCTCGGCATT
ATTTCACTGACGCATGGAACACATTTGACGCCTTAATTGT
TGTCGGTAGCGTCGTAGATATTGCTATCACTGAAGTCAAC
AACACTGAGGACAGCGCTCGCATTTCCATCACTTTCTTCC
GTCTTTTTCGAGTGATGCGATTGGTCAAGCTGCTGAGCAG
AGGGGAGGGAATTCGAACCCTACTCTGGACCTTTATCAAA
TCCTTCCAGGCACTGCCTTATGTTGCTTTGCTGATAGCCA
TGCTCTTCTTCATCTACGCTGTCATTGGCATGCAGGTGTT
TGGGAAAATTGCCATGGTGGATCACACTCAAATCAACAGG
AACAACAACTTTCAGACGTTCCCTCAGGCTGTGCTTCTGC
TCTTCAGGTGTGCTACGGGTGAAGCCTGGCAGGAGATCAT
GTTAGCATGTATGCCAGGCAAGCTGTGTGACCCGGAGTCA
GACTATAATCCTGGGGAAGAAATGACCTGCGGGAGCAGTT
TCGCCATCATCTACTTCATCACCTTCTACATGCTCTGCGC
CTTCCTGATCATTAACCTGTTTGTGGCTGTCATCATGGAC
AACTTCGACTATCTGACCCGTGATTGGTCAATTCTGGGGC
CACATCACCTTGATGAGTTTAAGAGGATTTGGTCAGAATA
TGACCCAGAGGCCAAGGGCAGAATAAAACATCTTGATGTA
GTGACGTTGTTGCGCCGTATTCAGCCTCCTCTCGGCTTTG
GGAAACTCTGTCCTCATAGAGTCGCCTGCAAGAGGCTGGT
GGCTATGAACATGCCCCTGAACAGTGACGGCACGGTCATG
TTTAACGCGACACTGTTTGCTCTCGTGAGAACCGCATTGA
AAATCAAAACAGAAGGTAACCTAGAACAAGCGAATGAAGA
GCTCCGAGCTGTGATTAAGAAGATCTGGAAGAGAACCAGC
ATGAAGCTTCTGGATCAAGTGGTTCCCCCTGCTGGTGATG
ATGAGGTAACGGTGGGGAAGTTCTATGCCACTTTCCTGAT
ACAGGACTACTTTAGGAAATTCAAGAAACGCAAAGAGGAA
GGCCTGGTGGGAGTTCATCCGGCACAGAACAACACGGCCA
TCGCACTGCAGGCTGGCCTTCGTACGCTGCATGACATTGG
GCCAGAAATCCGCCGTGCGATATCATGTGACCTGCAGGAT
GATGAGCTAGTAGACTTTATACCAGAGGAGGACGAAGAAA
TTTATAGGCGAAACGGAGGACTCTTTGGCAACCACATCAA
CCACATAAACGGAGACCCCCGGAGGAGCTCTGGCCACCAA
ACAAACGCCACACAGCGCCCCCTGCAGGTGCAGCCGCCCC
CACATTACGTCCACATGGAGCAGCCCGTGGGGCGTCTGGG
TCGCGCCAATGCCATGGCACAGCAAAACCATCATCGTCAC
CACCACCACCATCACCATCATCATCATCACAACAACTCCT
ACAACAAATCGCCCAAGTCCACCAACATCAACCTCAACAA
CGCCAACGTGTCCAGTTTACCCAATGGTGGACACAATCGC
TACTACGAACACGCTCCCGCTAATGGCTACCCAGGGTCAT
ATTACGGAGAATACGACAAGCCCAGGACCCCTCATGGGCA
AAGAAGGCGCTACTATGAGACATATATTAGATCGCAGGGC
AGCGACAGAAGACGACCCACGATACGCCGCGAAGAGGAGT
ATGAAGAAGATCGCTACTCTGGAGAGTATTACAGCGGAGA
GGAGTTTTATGAAGATGACAGCATGCTATCGGGTGATAGG
TACCCCAACAGTGACCAGGAGTACGAGACGCCGCGGGGTT
ACCATCATCCTGACAGTTACTATGAAGATGATGAGCAGCC
CCTTTATCACGATTCACATAGGTCACCAAAGAGAAGACTG
CTTCCTCCAACACCGCAAGGTAATCGGAGACCGTCGTTCA
ATTTTGAGTGTCTGCGCAGACAGAGCAGTCAAGACGATCT
TCCTCACCAGCGAACTGCTCTTCCGTTACATCTCATGCAA
CACCAGGTGATGGCAGTGGCGGGTCTGGACTCTAGCAGGG
CTCACAGGCTTTCACCAACTCGATCTACCAGATCATGGGC
TTCACCTCCTCCAACTCCTGCAAGTAAAGACCGGACGCCG
TACTACACACCGCTCATCCGCGTGGACCGTCCTCTAAGAG
ACAGCGCCAGCAGCAGCCATTCATCCATCAGGAAGAGCTC
GTGGTACACAGACGACCCTGAGTACCAGCAGAGGAACTTC
TCACCTGTTCACCTGCAGGTCCCACCCGAGTACAGGAACC
AGTACCTGCAGAAGAGAGGCAGCGCTACCAGCCTGGTGGA
GGCGGTCTTGATATCAGAAGGACTGGGTCGATACGCCAAG
GATCCCAAATTTGTGGCCGCCACAAAGCATGAGATTGCGG
ACGCGTGCGAGATGACCATTGACGAAATGGAAAGCGCCGC
CAGCCATCTTCTTAACGGTGGCATTACACCAGTAGTCAAC
GGAGTCAATGTGTTTCCCATACTGGGCCACAGAGACTACG
AGCTGCAGGACGTCTCGGCGAGCTACAGCGACGAGGAGCC
CGAACCCGAGCCCAGACCTCGTTACGAGGAGGACCTTGCA
GATGAAATGATATGCATTACCACTTTATAGCACCTGGTTT
GCTAAAAACTGATTTAGCGAAACAAACAAATATAAAGTTT
ATTTATTGGCTTACTACCTAAAGAAGTGCCTTCACAGCAG
AGCAGAAAGGCACCACAGGAACGGACGCAGCGCCGCCACC
AGGGGAGGACCGCCCGAACTTTCATTGGCTGCTTGTACCG
TCACTCCAGGAAACGGACCAATGAGCAGCAAGCCGAGGTA
ACCGGGGGGCAGTTCCAAGGTGATGACAATCAGAACGAAT
ATGTCATTACCTCAGTCACTTTATTAAGGGTTTTGCATAT
CAAGCACGTTGCAAGCTCAATGCAAGCTAAGTATGGCATA
TCCCTCCACAAAGGCTTTAGTTTCGGCCCGTATGATTCGT
TTTTAGTAAGGTTTTAGGTCAAGCGCATATTTTAGAGAAC
AAAAGCTAAGTCTACACTAACACTGGTTTACAATAAGGAT
ATCATGCAGGATTTTCAAGAGGAGTTCAGCATTTTGCGTT
GAATGCACTAGCAGACAGGTTATTTTTTTAATTTAGGATA
GCCTGTTTGATATTTCATAATATGCTGTAAATGACTTGTA
ATATATATAGAGCAAAAGACAACTTTGTAAAGAGACGTTC
TATATTTTGTAATTATGTACTGTACAAAAACAAAAAAGTC
AGCAATATTAATCCTAATTGATGTTAACTGCATTACGTAA
AAGACTACGAAATTCGGTGTTATTTTAATAGGTACTGTAC
TTTATTAAATTCTTTGCCTTTA

cacna1da TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA cacna1da-001 6662
cacna1da-002 (1) 5981
cacna1da-003 (1) 546
ncRNA cacna1da-004 (1) 840
mRNA ottdart00000001787 (1) 2432
ottdart00000001972 (1) 4125
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
cacna1da-001 Contained in:
OTHER cacna1da-001 TRANSCRIPT PAGES
  • Vega_Trans:OTTDART00000025578 (1)
  • PROTEIN PRODUCTSNo links to external site
    ZEBRAFISH SUPPORTING SEQUENCES
    Type Accession # Length (bp/aa) Analysis
    RNA GenBank:AY528224 (1) 6514bp
    GenBank:FP133311 (1) 604bp
    GenBank:EB949614 (1) 555bp
    GenBank:FP157175 (1) 520bp
    GenBank:EB957669 (1) 323bp
    CITATIONS (1)