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ZIRC
ZFIN ID: ZDB-TSCRIPT-110325-627
Transcript Name: kdm1a-005
Previous Name:

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Transcript Type: ncRNA
Annotation Status: retained intron
Strain: TU
Non Reference Strains:
Associated with Genes:
SEQUENCE
OTTDART00000049903 (1) [ Show ] (double-click sequence to select) [Download]
Select Analysis Tool
>tpe|OTTDART00000049903|OTTDARG00000035108|ZDB-GENE-030131-7828 kdm1a|no_translation kdm1a-005 LG_ AL844186.7 Danio rerio protein_coding KNOWN, 975 bp
GACAGTCGTCTGTTTCTTTGTGTGAAACCCCCCACAGCAG
CGAGGAGGAGAAGCCTCTGTCATCTGTGATGTTGTCCAAT
AAGAAGTCAGACCCAGGCTCCTCCTCTTCGTCAGGGGGTA
ATGGTGGTGATCGTGCTCCTGAAACCCTTGCTGCCCCTCA
GGCTGGTCCAGCGGGTCCCTCTGGCCCGATTTCAGCAGAT
GTGAAAAAGAAAGAAAGAGCCTCCCCAAGTGGAGAACCAG
GTGGACCCCCTCTGCCGCACCCTCCTGGACCAGGAGGCAT
TGATCAAGACTCTGCAGAGGGTCGTAGAACTAGTCGACGT
AAACGGGCAAAGGTAAACATCTCCAATAAATTTTCCTGTT
CTCTTCAAGAGAGAACAGGCACGATTGTGGTAGGCTTATT
TAGCTGAGTTTTACTGGATTTGAAAAAAGTAATATTATGA
ATGATATGGAATTTATTTTTTTTACTTTTAAATAAAAATA
TTATGTCCATTTTGACCCAAAGAGACATACAAAATATAAA
TATTTATAATTTGTAAATGTGATAAAATATGTTGATTTGT
GTAATTTTGCATTATTATAATTGTTTTTATTATTTTAGCA
GTGATGAGTAAATGTTCTTGATTAAGTGCATTCATTCAAG
TTGGTTGGATACTGGTAATTCTTAAATATACATTCTTATT
TTATGAAATTATTAAAAATGTGAACTTCATTCATTAATTT
TTCTTCGGCTTAGTCTCTGATTTATCAGGGGTCGCAACAG
AGGAATGAACTACTCTGGCTTATGTTTTACGCAGCGGATG
TCCTTCCAGCCTCAACCCAGCACCATACTGGGAAACACCC
ATACACTCGTATTAACACACACTCATACACTACAGACAAT
TTTGTTGTAGTATAGTTTTTGTTTTAATTGTGGTTCAGAT
ATTGTTGATGTAAAGAAATTTCACATAATTTCTCAATTGT
TTAATAATATGCTGG

kdm1a TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA kdm1a-201 (1)    Ensembl 3367
kdm1a-202 (1)    Ensembl 887
kdm1a-203 (1)    Ensembl 500
kdm1a-204 (1)    Ensembl 456
kdm1a-207 (1)    Ensembl 606
ncRNA kdm1a-005 975
kdm1a-006 (1)    Ensembl 1015
SEGMENT (CLONE AND PROBE) RELATIONSHIPS
kdm1a-005 Contained in:

Genome Resources: Vega_Trans:OTTDART00000049903 (1),  Ensembl_Trans:ENSDART00000149767 (1)
PROTEIN PRODUCTS No links to external site
ZEBRAFISH SUPPORTING SEQUENCES
Type Accession # Length (bp/aa) Analysis
RNA GenBank:EH454944 (1) 997 bp
GenBank:EH500909 (1) 958 bp
GenBank:EH437208 (1) 889 bp
CITATIONS (2)